RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CAPRIN2Q6IMN6 1127 aaKnown RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 POLNQ7Z5Q5 900 aa11.75□□□□□ -0.53
ACTN1-221ENST00000556571 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 GALNT6Q8NCL4 622 aa11.75□□□□□ -0.53
ACTN1-221ENST00000556571 STAMBPL1Q96FJ0 436 aa11.75□□□□□ -0.53
ACTN1-221ENST00000556571 POLR1EQ9GZS1 481 aaKnown RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 TWSG1Q9GZX9 223 aa11.75□□□□□ -0.53
ACTN1-221ENST00000556571 ETNK2Q9NVF9 386 aa11.75□□□□□ -0.53
ACTN1-221ENST00000556571 CNOT6Q9ULM6 557 aaKnown RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 PCDHGA6Q9Y5G7 932 aa11.75□□□□□ -0.53
ACTN1-221ENST00000556571 PCYT1BQ9Y5K3 369 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 OAS3Q9Y6K5 1087 aaKnown RBP11.75□□□□□ -0.53
ACTN1-221ENST00000556571 PIPSLA2A3N6 862 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 LGALS16A8MUM7 142 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 TMCO5BA8MYB1 307 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CREG1O75629 220 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 KIAA0754O94854 1291 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 NDUFA10O95299 355 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CLDN7O95471 211 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 MT-ND3P03897 115 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 XRCC1P18887 633 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-221ENST00000556571 GNLYP22749 145 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CES1P23141 567 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 SERPINB6P35237 376 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 PCK1P35558 622 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
ACTN1-221ENST00000556571 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CLCNKAP51800 687 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 GFERP55789 205 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 UBE2IP63279 158 aaKnown RBP11.74□□□□□ -0.53
ACTN1-221ENST00000556571 UBXN1Q04323 297 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 ITKQ08881 620 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 IRF2BP2Q7Z5L9 587 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 LRRC49Q8IUZ0 686 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 PHYKPLQ8IUZ5 450 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 RASGRP3Q8IV61 690 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 TEX26Q8N6G2 289 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 AOPEPQ8N6M6 819 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CPT1CQ8TCG5 803 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 SSC4DQ8WTU2 575 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CSPG4P5Q96PW8 444 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 PLEKHG4BQ96PX9 1271 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 SMIM14Q96QK8 99 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 OR6C1Q96RD1 312 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 TRIM7Q9C029 511 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 CARD9Q9H257 536 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 FAM83DQ9H4H8 585 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 NT5MQ9NPB1 228 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 FANCLQ9NW38 375 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 PADI1Q9ULC6 663 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 SPENQ96T58 3664 aaKnown RBP11.74□□□□□ -0.53
ACTN1-221ENST00000556571 ESPL1Q14674 2120 aa11.74□□□□□ -0.53
ACTN1-221ENST00000556571 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 GOLGA6L3A6NEY3 463 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 ENO4A6NNW6 628 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 GRID2O43424 1007 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 NUAK1O60285 661 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 UBXN7O94888 489 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 VIPP01282 170 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 FGF5P12034 268 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 AMD1P17707 334 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 CA4P22748 312 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 SEPHS1P49903 392 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 RPL26P61254 145 aaKnown RBP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 SH3BP2P78314 561 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 MYL5Q02045 173 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 TYRO3Q06418 890 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 SEMA5AQ13591 1074 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 DNASE1L3Q13609 305 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 TMEM26Q6ZUK4 368 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 TMEM135Q86UB9 458 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 SEC14L1Q92503 715 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 TGM7Q96PF1 710 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 WDR24Q96S15 920 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 LYSMD1Q96S90 227 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 SYT11Q9BT88 431 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 ZNF768Q9H5H4 540 aaKnown RBP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 CUEDC1Q9NWM3 386 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 OGFRQ9NZT2 677 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 TMEM63CQ9P1W3 806 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 LIMA1Q9UHB6 759 aaKnown RBP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 LNPEPQ9UIQ6 1025 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 RPL26L1Q9UNX3 145 aaKnown RBP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 PRRC2CQ9Y520 2896 aaKnown RBP11.73□□□□□ -0.53
ACTN1-221ENST00000556571 SCINQ9Y6U3 715 aa11.73□□□□□ -0.53
ACTN1-221ENST00000556571 C21orf140B9A014 251 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 SPAG6O75602 509 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 RASSF9O75901 435 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 FTLP02792 175 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-221ENST00000556571 PDGFAP04085 211 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 GZMAP12544 262 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 TYRP1P17643 537 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
ACTN1-221ENST00000556571 IL1R2P27930 398 aa11.72□□□□□ -0.53
ACTN1-221ENST00000556571 CASP14P31944 242 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms