RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 WDFY4Q6ZS81 3184 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CHD7Q9P2D1 2997 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SF3B1O75533 1304 aaKnown RBP eCLIP4.45□□□□□ -1.74e-12■■■■■ 275.7
ATXN3-241ENST00000556374 ZNF236Q9UL36 1845 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ANK1P16157 1881 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 UBE2QL1A1L167 161 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SLC15A5A6NIM6 579 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ASB14A6NK59 587 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SDR42E2A6NKP2 422 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FAM159BA6NKW6 160 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 EIF4E1BA6NMX2 242 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ENO4A6NNW6 628 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 LACTBL1A8MY62 500 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TMEM114B3SHH9 223 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TXNDC9O14530 226 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 DVL2O14641 736 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TIMM44O43615 452 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FAM189A1O60320 539 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 GRAP2O75791 330 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FAM155BO75949 473 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SNUPNO95149 360 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 EDN1P05305 212 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 POLBP06746 335 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CSH1P0DML2 217 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CSH2P0DML3 217 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SRGAP2BP0DMP2 458 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 T-ENOLP0DO92 83 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 EDNRBP24530 442 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PRDX6P30041 224 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CCND3P30281 292 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CDC25CP30307 473 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 GP5P40197 560 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PNPLA4P41247 253 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 MAGEA6P43360 314 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PTPN9P43378 593 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SLC1A6P48664 564 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 HSPA13P48723 471 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 RGS7P49802 495 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SULT1E1P49888 294 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PAPOLAP51003 745 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SCNN1GP51170 649 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 RABGGTBP53611 331 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PRKAA2P54646 552 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CDH8P55286 799 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 WNT3AP56704 352 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 RPL26P61254 145 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SP2Q02086 613 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CNTN2Q02246 1040 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 BST2Q10589 180 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SEMA5AQ13591 1074 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CUL3Q13618 768 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PRPSAP1Q14558 356 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FAM187BQ17R55 369 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 INSCQ1MX18 579 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TRIM60Q495X7 471 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 KHDC1Q4VXA5 237 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FASTKD1Q53R41 847 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 RABL3Q5HYI8 236 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SH2D4BQ5SQS7 431 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CELF3Q5SZQ8 465 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 RARS2Q5T160 578 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SYCP2LQ5T4T6 812 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 N4BP2L1Q5TBK1 243 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 GRTP1Q5TC63 336 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 BSPRYQ5W0U4 402 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PDPK2PQ6A1A2 396 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SLC9A4Q6AI14 798 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ITPRIPL1Q6GPH6 555 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ANO7Q6IWH7 933 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 C16orf89Q6UX73 402 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PACS1Q6VY07 963 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 DSTYKQ6XUX3 929 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 DENND5BQ6ZUT9 1274 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 DHDDSQ86SQ9 333 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PSTKQ8IV42 348 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 WDTC1Q8N5D0 677 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC33Q8N5R6 958 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 LRRC52Q8N7C0 313 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PLD5Q8N7P1 536 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 RBM15BQ8NDT2 890 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 OR6B3Q8NGW1 331 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SLC25A43Q8WUT9 341 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 HTR3CQ8WXA8 447 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SOCS4Q8WXH5 440 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PGBD4Q96DM1 585 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PPP1R2P1Q96PQ5 205 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TUBGCP5Q96RT8 1024 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 PEBP4Q96S96 227 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 TTC1Q99614 292 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 ECSITQ9BQ95 431 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 WDR83Q9BRX9 315 aaKnown RBP4.44□□□□□ -1.7
ATXN3-241ENST00000556374 MECRQ9BV79 373 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 GPR87Q9BY21 358 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 SPATC1LQ9H0A9 340 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 C1orf21Q9H246 121 aa4.44□□□□□ -1.7
ATXN3-241ENST00000556374 FZD8Q9H461 694 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms