RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 KLF6Q99612 283 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 PRMT1Q99873 361 aaKnown RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 TRIM62Q9BVG3 475 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 CPEB1Q9BZB8 566 aaKnown RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 CLPBQ9H078 707 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 CDH19Q9H159 772 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 MMRN2Q9H8L6 949 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 ZNF71Q9NQZ8 489 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 FOXJ2Q9P0K8 574 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 AKAP7Q9P0M2 348 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 APOBEC3BQ9UH17 382 aaKnown RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 XPO7Q9UIA9 1087 aaKnown RBP4.89□□□□□ -1.63
ATXN3-232ENST00000555381 VPS28Q9UK41 221 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 NAALADL1Q9UQQ1 740 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 TRAF3IP3Q9Y228 551 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 HS3ST2Q9Y278 367 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 OR51B4Q9Y5P0 310 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 FADS3Q9Y5Q0 445 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 ATP23Q9Y6H3 246 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 DOPEY2Q9Y3R5 2298 aa4.89□□□□□ -1.63
ATXN3-232ENST00000555381 IGLON5A6NGN9 336 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ZNF839A8K0R7 811 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TMEM110-MUSTN1A8MSY1 372 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ZNF891A8MT65 544 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 POLR2DO15514 142 aaKnown RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 MTSS1O43312 755 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 VPS4BO75351 444 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CLDN11O75508 207 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TRUB2O95900 331 aaKnown RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 IL18BPO95998 194 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 MT-CO1P00395 513 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ENO2P09104 434 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 PAEPP09466 180 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ALPIP09923 528 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TRIM49P0CI25 452 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TRIM49CP0CI26 452 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 SRCP12931 536 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ADRB3P13945 408 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CTSEP14091 401 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ITIH1P19827 911 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 NR2F2P24468 414 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ETV5P41161 510 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 NUMBP49757 651 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 MECP2P51608 486 aaKnown RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 PPARDQ03181 441 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 SLC20A2Q08357 652 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 DBPQ10586 325 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 KLRB1Q12918 225 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 MTA1Q13330 715 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CUL2Q13617 745 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 STILQ15468 1287 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 NFIL3Q16649 462 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TPRG1LQ5T0D9 272 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 SYPL2Q5VXT5 272 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 VASNQ6EMK4 673 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 FBXL22Q6P050 247 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 GKN2Q86XP6 184 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 FAM186BQ8IYM0 893 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 RBFAQ8N0V3 343 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 Q8N9G6 341 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CHST14Q8NCH0 376 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 LINC00301Q8NCQ3 95 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 KIAA0895Q8NCT3 520 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 DENND6BQ8NEG7 585 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 RAB7BQ96AH8 199 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CENPTQ96BT3 561 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 EEF2KMTQ96G04 330 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 RPRD1AQ96P16 312 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TAAR9Q96RI9 348 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 LRRC61Q9BV99 259 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 EDEM3Q9BZQ6 932 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 MIS12Q9H081 205 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TCEAL2Q9H3H9 227 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 ZSCAN16Q9H4T2 348 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 DLL4Q9NR61 685 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 EXOC1Q9NV70 894 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 RIC8BQ9NVN3 520 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 IL36AQ9UHA7 158 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 APPL1Q9UKG1 709 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CROTQ9UKG9 612 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TBC1D30Q9Y2I9 924 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 PCDHGA3Q9Y5H0 932 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TNPO3Q9Y5L0 923 aaKnown RBP4.88□□□□□ -1.63
ATXN3-232ENST00000555381 CREBBPQ92793 2442 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 COL12A1Q99715 3063 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 TMEM131Q92545 1883 aa4.88□□□□□ -1.63
ATXN3-232ENST00000555381 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-232ENST00000555381 MYLKQ15746 1914 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 MYO9AB2RTY4 2548 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 K7ERQ8 282 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 RNF103O00237 685 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 NEMP1O14524 444 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 NKX2-8O15522 239 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 ZW10O43264 779 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 SMAD6O43541 496 aaKnown RBP4.87□□□□□ -1.63
ATXN3-232ENST00000555381 KLRC4O43908 158 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 CUTAO60888 179 aa4.87□□□□□ -1.63
ATXN3-232ENST00000555381 KRT38O76015 456 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms