RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 ME2P23368 584 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 ALDH9A1P49189 494 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SPDYE7PQ495Y7 208 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 CLEC4FQ8N1N0 589 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 RBM15BQ8NDT2 890 aaKnown RBP16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SUV39H2Q9H5I1 410 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 RNPEPL1Q9HAU8 725 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SPHK2Q9NRA0 654 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 CDH22Q9UJ99 828 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 TYROBPO43914 113 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 COL6A2P12110 1019 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 FAM109BQ6ICB4 259 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 TMEM154Q6P9G4 183 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 ZC3HC1Q86WB0 502 aaKnown RBP16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 FAM162AQ96A26 154 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 DPY30Q9C005 99 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 ZNF334Q9HCZ1 680 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 POLR3BQ9NW08 1133 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 POLG2Q9UHN1 485 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SLC13A4Q9UKG4 626 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 AZIN1O14977 448 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 CYP2A7P20853 494 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SOAT1P35610 550 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 TRIM74Q86UV6 250 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 CPNE9Q8IYJ1 553 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 RBFAQ8N0V3 343 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 BCL7CQ8WUZ0 217 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 MAGED4Q96JG8 741 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SLC25A23Q9BV35 468 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 PRKAB1Q9Y478 270 aa16.07■□□□□ 0.16
PPP4R3A-205ENST00000554684 C9JVG2 144 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SIN3BO75182 1162 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 PGFP49763 221 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SATB1Q01826 763 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 FRG1Q14331 258 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 HIST2H2ACQ16777 129 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 FAM26DQ5JW98 314 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SNAP47Q5SQN1 464 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 HIST2H2AA3Q6FI13 130 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 DPY19L3Q6ZPD9 716 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 FAM13CQ8NE31 585 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 FEM1AQ9BSK4 669 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 C1QTNF7Q9BXJ2 289 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CCDC90BQ9GZT6 254 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 GULP1Q9UBP9 304 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 RGSL1A5PLK6 1076 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 UBXN8O00124 270 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 RFPL1O75677 317 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CATP04040 527 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 ANXA5P08758 320 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CD70P32970 193 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 PXNP49023 591 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 ATP6V0D1P61421 351 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SLC34A1Q06495 639 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SCAPQ12770 1279 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 TSNQ15631 228 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 PITRM1Q5JRX3 1037 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 TCEAL8Q8IYN2 117 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CFAP206Q8IYR0 622 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SIPA1Q96FS4 1042 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CDKN2AIPNLQ96HQ2 116 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CCDC134Q9H6E4 229 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 PLK4O00444 970 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 TGDSO95455 350 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 FOSL2P15408 326 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 PIK3R1P27986 724 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 PLOD1Q02809 727 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SLC18A2Q05940 514 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 KLF10Q13118 480 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 LACTB2Q53H82 288 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 TCEAL5Q5H9L2 206 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SLC8B1Q6J4K2 584 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 CLYBLQ8N0X4 340 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 C10orf82Q8WW14 230 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 FGF13Q92913 245 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 SEPHS2Q99611 448 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 DYRK1BQ9Y463 629 aa16.06■□□□□ 0.16
PPP4R3A-205ENST00000554684 GSC2O15499 205 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 FKBP6O75344 327 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 CEBPBP17676 345 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 AP1S1P61966 158 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 AASDHQ4L235 1098 aaPredicted RBP16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 CARD16Q5EG05 197 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 CAPRIN2Q6IMN6 1127 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 ZYG11AQ6WRX3 759 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 ADAMTSL2Q86TH1 951 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 SERPINA9Q86WD7 417 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 PLD6Q8N2A8 252 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 CNTD1Q8N815 330 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 VPS37AQ8NEZ2 397 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 MIPOL1Q8TD10 442 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 CYGBQ8WWM9 190 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 SCAMP4Q969E2 229 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 ASB2Q96Q27 587 aa16.05■□□□□ 0.16
PPP4R3A-205ENST00000554684 RTP3Q9BQQ7 232 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms