RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TAS2R40P59535 323 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 ERVFC1-1P60608 527 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 MRPS34P82930 218 aaKnown RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 RPL36AP83881 106 aaKnown RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 RELQ04864 619 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 LRMPQ12912 555 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 DECR1Q16698 335 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 SOWAHCQ53LP3 525 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 IRAK1BP1Q5VVH5 260 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 BRAT1Q6PJG6 821 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 C18orf65Q6ZTR6 163 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 TUBA1AQ71U36 451 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 SDCCAG8Q86SQ7 713 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 GPR180Q86V85 440 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 TEX11Q8IYF3 940 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 OR8K5Q8NH50 307 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 SPATA20Q8TB22 786 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 ABTB1Q969K4 478 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-211ENST00000554437 TAAR8Q969N4 342 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 CDCA5Q96FF9 252 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 TIGD1Q96MW7 591 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 QRFPRQ96P65 431 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PCYT2Q99447 389 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 TUBA1CQ9BQE3 449 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PIGMQ9H3S5 423 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PLEKHA5Q9HAU0 1116 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 LRRC4Q9HBW1 653 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PLSCR4Q9NRQ2 329 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 STK39Q9UEW8 545 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 FBXL2Q9UKC9 423 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 KLHL20Q9Y2M5 609 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 PCDHAC2Q9Y5I4 1007 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 SESN1Q9Y6P5 492 aa4.97□□□□□ -1.61
SCFD1-211ENST00000554437 FRMD3A2A2Y4 597 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 PRAC2D3DTV9 90 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 TULP2O00295 520 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 DAB1O75553 588 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 KCNK5O95279 499 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 IL15P40933 162 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-211ENST00000554437 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-211ENST00000554437 POU3F1Q03052 451 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-211ENST00000554437 ACSM2AQ08AH3 577 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 CDC37Q16543 378 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF805Q5CZA5 627 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 SPATA1Q5VX52 437 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 ACSM2BQ68CK6 577 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 TRNP1Q6NT89 227 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 TICAM1Q8IUC6 712 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 C1orf87Q8N0U7 546 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 TTC39CQ8N584 583 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 RBMXL3Q8N7X1 1067 aaKnown RBP4.96□□□□□ -1.62
SCFD1-211ENST00000554437 ACVR1CQ8NER5 493 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 OR1J2Q8NGS2 313 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 SECTM1Q8WVN6 248 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 SORCS1Q8WY21 1168 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 ELMOD3Q96FG2 381 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 CENPOQ9BU64 300 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 SIL1Q9H173 461 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 EBF2Q9HAK2 575 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 TMEM30AQ9NV96 361 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 UBA2Q9UBT2 640 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-211ENST00000554437 FBXW11Q9UKB1 542 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 POU2F3Q9UKI9 436 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 PADI3Q9ULW8 664 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 CGNL1Q0VF96 1302 aa4.96□□□□□ -1.62
SCFD1-211ENST00000554437 EIF4E1BA6NMX2 242 aaKnown RBP4.95□□□□□ -1.62
SCFD1-211ENST00000554437 PTGES3LE9PB15 166 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 KCNN4O15554 427 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 BUB3O43684 328 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 GFPT2O94808 682 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 CAMTA2O94983 1202 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 CLTBP09497 229 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 MYOD1P15172 320 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 MCM3P25205 808 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 UBA7P41226 1012 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 APOBEC1P41238 236 aaKnown RBP4.95□□□□□ -1.62
SCFD1-211ENST00000554437 CDH8P55286 799 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 MYLK3Q32MK0 819 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 C18orf63Q68DL7 685 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 JADE1Q6IE81 842 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 GFRALQ6UXV0 394 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 CHST9Q7L1S5 443 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 FASTKD5Q7L8L6 764 aaKnown RBP4.95□□□□□ -1.62
SCFD1-211ENST00000554437 EXOC3L1Q86VI1 746 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 TMEM219Q86XT9 240 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 NRROSQ86YC3 692 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 POC1AQ8NBT0 407 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 HJURPQ8NCD3 748 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-211ENST00000554437 OR5R1Q8NH85 324 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 BBS10Q8TAM1 723 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 HM13Q8TCT9 377 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 PIGTQ969N2 578 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 EGLN2Q96KS0 407 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 BARD1Q99728 777 aaKnown RBP4.95□□□□□ -1.62
SCFD1-211ENST00000554437 NUDT16L1Q9BRJ7 211 aaKnown RBP4.95□□□□□ -1.62
SCFD1-211ENST00000554437 CSTL1Q9H114 145 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF556Q9HAH1 456 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 SETD4Q9NVD3 440 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 MTMR10Q9NXD2 777 aa4.95□□□□□ -1.62
SCFD1-211ENST00000554437 PTPRCP08575 1304 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms