RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 TSPAN33Q86UF1 283 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 ARHGAP12Q8IWW6 846 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 MCOLN2Q8IZK6 566 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 CLEC18CQ8NCF0 446 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 GALNT6Q8NCL4 622 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 FNIP1Q8TF40 1166 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 SSC4DQ8WTU2 575 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
ACTN1-212ENST00000554158 TGM7Q96PF1 710 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 OR6C1Q96RD1 312 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 KCTD15Q96SI1 283 aaPredicted RBP8.07□□□□□ -1.12
ACTN1-212ENST00000554158 MGME1Q9BQP7 344 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 RIOK2Q9BVS4 552 aaKnown RBP8.07□□□□□ -1.12
ACTN1-212ENST00000554158 NUP62CLQ9H1M0 184 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 CLSTN2Q9H4D0 955 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 APMAPQ9HDC9 416 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 NT5MQ9NPB1 228 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 ACSS2Q9NR19 701 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 PKD2L2Q9NZM6 624 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 VPS18Q9P253 973 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 PDP2Q9P2J9 529 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 CPNE7Q9UBL6 633 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 PADI1Q9ULC6 663 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 MRPS18BQ9Y676 258 aaKnown RBP8.07□□□□□ -1.12
ACTN1-212ENST00000554158 OAS3Q9Y6K5 1087 aaKnown RBP8.07□□□□□ -1.12
ACTN1-212ENST00000554158 SCINQ9Y6U3 715 aa8.07□□□□□ -1.12
ACTN1-212ENST00000554158 MYO9AB2RTY4 2548 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 SHANK1Q9Y566 2161 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 PDZK1P1A8MUH7 402 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 CREG1O75629 220 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 UBXN7O94888 489 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 DLGAP3O95886 979 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 ATP1A1P05023 1023 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 ANKRD34CP0C6C1 535 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 ATP1A3P13637 1013 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TYRP1P17643 537 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 GNLYP22749 145 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 CES1P23141 567 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 VARSP26640 1264 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 MIPP30301 263 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 GARSP41250 739 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 PMS2P54278 862 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 RPS15P62841 145 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 DNASE1L3Q13609 305 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 KRT81Q14533 505 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 CA9Q16790 459 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 INSCQ1MX18 579 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TDRD12Q587J7 1177 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 CCDC122Q5T0U0 273 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TIGD7Q6NT04 549 aaPredicted RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 IYDQ6PHW0 289 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TECPR1Q7Z6L1 1165 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 NLRP8Q86W28 1048 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 PPP1R3BQ86XI6 285 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 NPWQ8N729 165 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 HSPH1Q92598 858 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 SCAMP4Q969E2 229 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TRIM11Q96F44 468 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 ZDHHC12Q96GR4 267 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 ELMO2Q96JJ3 720 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 C9orf72Q96LT7 481 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 MCCC1Q96RQ3 725 aaPredicted RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 USB1Q9BQ65 265 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 SLC25A23Q9BV35 468 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TBC1D10AQ9BXI6 508 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 POLR1EQ9GZS1 481 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 MRPL47Q9HD33 250 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 PDE7BQ9NP56 450 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 CWC15Q9P013 229 aaKnown RBP8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TBC1D29Q9UFV1 150 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TLK1Q9UKI8 766 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 PRKAB1Q9Y478 270 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 TEX15Q9BXT5 2789 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 PIKFYVEQ9Y2I7 2098 aa8.06□□□□□ -1.12
ACTN1-212ENST00000554158 MN1Q10571 1320 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-212ENST00000554158 A0A0J9YYE9 177 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 C1orf232A0A0U1RR37 186 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 LILRA5A6NI73 299 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 C21orf140B9A014 251 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 TOX3O15405 576 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-212ENST00000554158 GRID2O43424 1007 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 TRBC1P01850 177 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 VCLP18206 1134 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 AMPD1P23109 780 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 SSR1P43307 286 aaKnown RBP8.05□□□□□ -1.12
ACTN1-212ENST00000554158 ZNF165P49910 485 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 OGDHQ02218 1023 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 MAMLD1Q13495 774 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 DPYSQ14117 519 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 SMTNL2Q2TAL5 461 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 BOLA3Q53S33 107 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 ANKRD20A8PQ5CZ79 823 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 ZNF569Q5MCW4 686 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 CACHD1Q5VU97 1274 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 IRGCQ6NXR0 463 aa8.05□□□□□ -1.12
ACTN1-212ENST00000554158 LRRC49Q8IUZ0 686 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms