RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 SLC25A51Q9H1U9 297 aa10.65□□□□□ -0.7
PNN-203ENST00000554117 TRIT1Q9H3H1 467 aaKnown RBP10.65□□□□□ -0.7
PNN-203ENST00000554117 MAGEE1Q9HCI5 957 aa10.65□□□□□ -0.7
PNN-203ENST00000554117 SARS2Q9NP81 518 aaKnown RBP10.65□□□□□ -0.7
PNN-203ENST00000554117 HACD3Q9P035 362 aa10.65□□□□□ -0.7
PNN-203ENST00000554117 LOC400499M0QZD8 3231 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 TRBV23OR9-2A0A075B6M9 112 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 A0A1W2PNU3 283 aaPredicted RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 EFCAB7A8K855 629 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 PDZK1P1A8MUH7 402 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 B8ZZF3 427 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 AKR1B15C9JRZ8 316 aaPredicted RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 PPM1DO15297 605 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 EFSO43281 561 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 PSTPIP1O43586 416 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 VEGFDO43915 354 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 NUAK1O60285 661 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 MFAP3LO75121 409 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 STK10O94804 968 aaKnown RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 PTMAP06454 111 aaKnown RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 AMD1P17707 334 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 CTNNA2P26232 953 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 CD1CP29017 333 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 CYLC1P35663 651 aaPredicted RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 DCDC1P59894 354 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 CDK18Q07002 472 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 NFATC2Q13469 925 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 SQSTM1Q13501 440 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 C16orf72Q14CZ0 275 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 QPCTQ16769 361 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 ALS2CLQ60I27 953 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 KCTD16Q68DU8 428 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 SLC9A4Q6AI14 798 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 WDR74Q6RFH5 385 aaPredicted RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 NYAP1Q6ZVC0 841 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 ZFAND4Q86XD8 727 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 SFRP1Q8N474 314 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 ARRDC2Q8TBH0 407 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 BRSK1Q8TDC3 778 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 PATE1Q8WXA2 126 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 ART4Q93070 314 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 RNF25Q96BH1 459 aaPredicted RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 NSMCE3Q96MG7 304 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 CATSPER2Q96P56 530 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 VAT1Q99536 393 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 FSD1LQ9BXM9 530 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 PACSIN1Q9BY11 444 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 TRABDQ9H4I3 376 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 TRIM39Q9HCM9 518 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 KLHL8Q9P2G9 620 aaPredicted RBP10.64□□□□□ -0.71
PNN-203ENST00000554117 KCNK6Q9Y257 313 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 PKP3Q9Y446 797 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 ZNF711Q9Y462 761 aa10.64□□□□□ -0.71
PNN-203ENST00000554117 PMS2P1A4D2B8 440 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 A8MU76 341 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 B4E171 279 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.63□□□□□ -0.71
PNN-203ENST00000554117 SLC28A2O43868 658 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 KCNJ13O60928 360 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 DNAJC6O75061 913 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 PPFIA2O75334 1257 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 ZNF189O75820 626 aaPredicted RBP10.63□□□□□ -0.71
PNN-203ENST00000554117 NDST3O95803 873 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 SOD1P00441 154 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 THRAP10827 490 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 PLA2G2AP14555 144 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 IDSP22304 550 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 ETV5P41161 510 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 TSPAN7P41732 249 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 NAP1L1P55209 391 aaKnown RBP10.63□□□□□ -0.71
PNN-203ENST00000554117 MC1RQ01726 317 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 NIPAL4Q0D2K0 466 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 ITGA9Q13797 1035 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 TGIF1Q15583 401 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 NKAIN2Q5VXU1 208 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 KAZNQ674X7 775 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 PRICKLE2Q7Z3G6 844 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 VSTM4Q8IW00 320 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 RBM12BQ8IXT5 1001 aaKnown RBP10.63□□□□□ -0.71
PNN-203ENST00000554117 CACNA2D3Q8IZS8 1091 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 PQLC3Q8N755 202 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 PLD5Q8N7P1 536 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 TTC9Q92623 222 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 HAUS1Q96CS2 278 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 CXorf40BQ96DE9 158 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 IMP4Q96G21 291 aaKnown RBP10.63□□□□□ -0.71
PNN-203ENST00000554117 RBM41Q96IZ5 413 aaKnown RBP10.63□□□□□ -0.71
PNN-203ENST00000554117 PPP1R2P1Q96PQ5 205 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 PLEKHG4BQ96PX9 1271 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 AGAP2Q99490 1192 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 TRIM5Q9C035 493 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 OR2AG1Q9H205 316 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 KLC4Q9NSK0 619 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 SPTLC3Q9NUV7 552 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 SHOC2Q9UQ13 582 aa10.63□□□□□ -0.71
PNN-203ENST00000554117 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms