RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 TADA1Q96BN2 335 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 RSPRY1Q96DX4 576 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 STAMBPL1Q96FJ0 436 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PPP1R16AQ96I34 528 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SHDQ96IW2 340 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MAP6Q96JE9 813 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ZFYVE19Q96K21 471 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 RPL10LQ96L21 214 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SIGLEC10Q96LC7 697 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 GUCD1Q96NT3 240 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SERPINB12Q96P63 405 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 RANBP9Q96S59 729 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 NELL2Q99435 816 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 C19orf43Q9BQ61 176 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MLPHQ9BV36 600 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FICDQ9BVA6 458 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 STMN4Q9H169 189 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 NEUROG2Q9H2A3 272 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CDC42EP4Q9H3Q1 356 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SEMA4AQ9H3S1 761 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TRABDQ9H4I3 376 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ZNF552Q9H707 407 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 VPS37BQ9H9H4 285 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MRM3Q9HC36 420 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 KCTD5Q9NXV2 234 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 NSMCE4AQ9NXX6 385 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 GTSE1Q9NYZ3 720 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 THAP10Q9P2Z0 257 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 HECAQ9UBI9 543 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 LHX3Q9UBR4 397 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SLCO3A1Q9UIG8 710 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 RIMKLBQ9ULI2 386 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MRPS17Q9Y2R5 130 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 RAI2Q9Y5P3 530 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MAD1L1Q9Y6D9 718 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TEX264Q9Y6I9 313 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 IKBKGQ9Y6K9 419 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FAM169AQ9Y6X4 670 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ANKRD36A6QL64 1941 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CENPFP49454 3210 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TEX51A0A1B0GUA7 166 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 C1QTNF3-AMACRE9PGA6 284 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 F5H423 210 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SPECC1L-ADORA2AF8WAN1 911 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MAP2K7O14733 419 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 RIPK2O43353 540 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SMAD6O43541 496 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SYNCRIPO60506 623 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TCEA3O75764 348 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 USP1O94782 785 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM63AO94886 807 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PAPSS2O95340 614 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PRAMEF1O95521 474 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MT-CO1P00395 513 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MMP2P08253 660 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 NUDT17P0C025 328 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MYZAPP0CAP1 466 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 CYP2A6P11509 494 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 NME1P15531 152 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PGAM1P18669 254 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MGAT1P26572 445 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 ECHS1P30084 290 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 HSD17B3P37058 310 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 HADHAP40939 763 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MAGEA3P43357 314 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SUOXP51687 545 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 NIPAL4Q0D2K0 466 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 NAB1Q13506 487 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 FRG1Q14331 258 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SPARCL1Q14515 664 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 STARD3Q14849 445 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TAF1AQ15573 450 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SLC44A4Q53GD3 710 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 DGKKQ5KSL6 1271 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SYCP2LQ5T4T6 812 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 ANKRD22Q5VYY1 191 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 ZDHHC20Q5W0Z9 365 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 FBXW10Q5XX13 1052 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 BRAT1Q6PJG6 821 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 KDELC1Q6UW63 502 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SERPINA13PQ6UXR4 307 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 GDPD4Q6W3E5 623 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 KDELC2Q7Z4H8 507 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 ADHFE1Q8IWW8 467 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 RAVER1Q8IY67 606 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 IQCKQ8N0W5 287 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SYNPOQ8N3V7 929 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PGBD5Q8N414 524 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 RIBC1Q8N443 379 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 SLC25A41Q8N5S1 370 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 GSDMBQ8TAX9 411 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 STYXQ8WUJ0 223 aa5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PDCD6IPQ8WUM4 868 aaKnown RBP5.02□□□□□ -1.61
VTI1B-202ENST00000553619 PTPRN2Q92932 1015 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms