RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 DNAJC6O75061 913 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 SLC25A14O95258 325 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 FTH1P19P0C7X4 201 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 CKMT1AP12532 417 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 CKMT2P17540 419 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 PSMA3P25788 255 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 CASQ1P31415 396 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 PAFAH1B1P43034 410 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 POLD2P49005 469 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 ACADVLP49748 655 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 ILF3Q12906 894 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 GPS1Q13098 491 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 NFATC2Q13469 925 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 C1orf61Q13536 156 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIP13Q15645 432 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 CHRNA6Q15825 494 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 PYCR3Q53H96 274 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 LDLRAP1Q5SW96 308 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 GALNT13Q8IUC8 556 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 OR13C4Q8NGS5 318 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 STYXQ8WUJ0 223 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 PTCD2Q8WV60 388 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 DNAJC1Q96KC8 554 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 APOLD1Q96LR9 279 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 GSDMCQ9BYG8 508 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 TMEM168Q9H0V1 697 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 NLE1Q9NVX2 485 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 PIH1D1Q9NWS0 290 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 FKBPLQ9UIM3 349 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 RIMKLBQ9ULI2 386 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 TMEM98Q9Y2Y6 226 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 KCTD3Q9Y597 815 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 U3KQA8 63 aa11.6□□□□□ -0.55
TRAFD1-209ENST00000552896 CHUKO15111 745 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 YY2O15391 372 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 GPR39O43194 453 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 VEGFDO43915 354 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 NUAK1O60285 661 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 RFPL3O75679 317 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 SRP72O76094 671 aaKnown RBP11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIM16O95361 564 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ASMTLO95671 621 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 FUCA1P04066 466 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ADRB1P08588 477 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 TPH1P17752 444 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ITGALP20701 1170 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ACP1P24666 158 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ADCY8P40145 1251 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 GRIA1P42261 906 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 VPS41P49754 854 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 DAB2P98082 770 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 XIAPP98170 497 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ILKQ13418 452 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 PEX6Q13608 980 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 PTK6Q13882 451 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 PTPRCAPQ14761 206 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 PPP1R7Q15435 360 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 CERCAMQ5T4B2 595 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ARMC3Q5W041 872 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ZNF534Q76KX8 674 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 NLRP9Q7RTR0 991 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ADGRG6Q86SQ4 1221 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 PEX13Q92968 403 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 GLMNQ92990 594 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ULK4Q96C45 1275 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 C16orf45Q96MC5 204 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 OR2AG1Q9H205 316 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 TRIM39Q9HCM9 518 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 ATXN10Q9UBB4 475 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 TMPRSS11EQ9UL52 423 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 TCAF1Q9Y4C2 921 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 PCDHGA1Q9Y5H4 931 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 UNC13CQ8NB66 2214 aa11.59□□□□□ -0.55
TRAFD1-209ENST00000552896 AGAP14A8MT82 685 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 TMEM63AO94886 807 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 GP1BAP07359 652 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 CDK4P11802 303 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 ZNF8P17098 575 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 ADRA1DP25100 572 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 RPIAP49247 311 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 DUSP3P51452 185 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 FOXK2Q01167 660 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 CTBSQ01459 385 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 ACVR1Q04771 509 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 DNAJC3Q13217 504 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 NR0B2Q15466 257 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 TCEA2Q15560 299 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 SKIDA1Q1XH10 827 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 GPR33Q49SQ1 333 aa11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 KHDC1Q4VXA5 237 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-209ENST00000552896 GPRC6AQ5T6X5 926 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms