RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 STK38LQ9Y2H1 464 aa8.12□□□□□ -1.11
CHPT1-208ENST00000552215 CEP250Q9BV73 2442 aa8.12□□□□□ -1.11
CHPT1-208ENST00000552215 IGLV3-10A0A075B6K4 115 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 FAM237BA0A1B0GVD1 139 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ZBTB14O43829 449 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 CACNG3O60359 315 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 SIX3O95343 332 aaPredicted RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 EIF2S1P05198 315 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ADRB3P13945 408 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 MDH1P40925 334 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 IL2P60568 153 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 GALNTL6Q49A17 601 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 GLIPR1L2Q4G1C9 344 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 AARS2Q5JTZ9 985 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 GPRC6AQ5T6X5 926 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 FAM219BQ5XKK7 198 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 KDELC1Q6UW63 502 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TAF8Q7Z7C8 310 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 CCNJLQ8IV13 435 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 PLD6Q8N2A8 252 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 AGGF1Q8N302 714 aaeCLIP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 PPFIBP2Q8ND30 876 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ARRDC3Q96B67 414 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TOE1Q96GM8 510 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 MGME1Q9BQP7 344 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 NMRAL1Q9HBL8 299 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 PRPF4O43172 522 aaKnown RBP eCLIP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 USP1O94782 785 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ALDH1A2O94788 518 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 PKMP14618 531 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TIMP2P16035 220 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ACTR1BP42025 376 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 HALP42357 657 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ACTR1AP61163 376 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 RFTN1Q14699 578 aaPredicted RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TAF1AQ15573 450 aaPredicted RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 AGAP9Q5VTM2 703 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 CRLF3Q8IUI8 442 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 E2F7Q96AV8 911 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TSPAN17Q96FV3 270 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ZNF599Q96NL3 588 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ACE2Q9BYF1 805 aaPredicted RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TBC1D17Q9HA65 648 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 CAPN10Q9HC96 672 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 IL26Q9NPH9 171 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 KLHL14Q9P2G3 628 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 MAFFQ9ULX9 164 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TCF20Q9UGU0 1960 aaKnown RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 APOA4P06727 396 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TTPAP49638 278 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 IHHQ14623 411 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 SETDB1Q15047 1291 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 KIF19Q2TAC6 998 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 AMZ1Q400G9 498 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TEDDM1Q5T9Z0 273 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 GRTP1Q5TC63 336 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 TRPC4APQ8TEL6 797 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 SLC44A1Q8WWI5 657 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ROPN1BQ9BZX4 212 aaPredicted RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 ROPN1Q9HAT0 212 aaPredicted RBP8.11□□□□□ -1.11
CHPT1-208ENST00000552215 KLC4Q9NSK0 619 aa8.11□□□□□ -1.11
CHPT1-208ENST00000552215 LRRC14BA6NHZ5 514 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 C9JVG2 144 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 CDC7O00311 574 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 EIF3HO15372 352 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 RNGTTO60942 597 aaKnown RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 CTSLP07711 333 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 SERPINB4P48594 390 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 USP4Q13107 963 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 SMAD4Q13485 552 aaKnown RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 TAZQ16635 292 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 TMEM196Q5HYL7 178 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 GKAP1Q5VSY0 366 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 LRIG3Q6UXM1 1119 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 ZNF534Q76KX8 674 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 NLRP9Q7RTR0 991 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 ZNF572Q7Z3I7 529 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 C10orf107Q8IVU9 208 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 LILRA3Q8N6C8 439 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 PTGR2Q8N8N7 351 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 HIPK4Q8NE63 616 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 LRRC39Q96DD0 335 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 TSSK1BQ9BXA7 367 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 XKR8Q9H6D3 395 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 MANSC1Q9H8J5 431 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 NCKIPSDQ9NZQ3 722 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 SIT1Q9Y3P8 196 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 VWA8A3KMH1 1905 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 LRRC72A6NJI9 287 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 UBXN8O00124 270 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 CACNB4O00305 520 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 LDB2O43679 373 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 RRP9O43818 475 aaKnown RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 ZMPSTE24O75844 475 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 ALADP13716 330 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
CHPT1-208ENST00000552215 RAB10P61026 200 aa8.1□□□□□ -1.11
CHPT1-208ENST00000552215 CYP4F2P78329 520 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms