RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PITRM1Q5JRX3 1037 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 EFCAB3Q8N7B9 438 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 PAF1Q8N7H5 531 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 OR2AP1Q8NGE2 309 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 GRIN3AQ8TCU5 1115 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 TRPC4APQ8TEL6 797 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 C19orf60Q96EN9 201 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 LINGO1Q96FE5 620 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 RPL10LQ96L21 214 aaKnown RBP13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 NDE1Q9NXR1 346 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 CCL26Q9Y258 94 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
RAB3IP-216ENST00000552199 C1orf232A0A0U1RR37 186 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 STX16-NPEPL1H3BU86 382 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 STX16O14662 325 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 NVLO15381 856 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CLDN7O95471 211 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SRCP12931 536 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 BMP1P13497 986 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SERPINA4P29622 427 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CTSOP43234 321 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ERFP50548 548 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CLCN7P51798 805 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 EPHA5P54756 1037 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 NAA20P61599 178 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CLCQ05315 142 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 EML3Q32P44 896 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 FAM219BQ5XKK7 198 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 KANK2Q63ZY3 851 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ANKS6Q68DC2 871 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 TXNDC11Q6PKC3 985 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 FAM151BQ6UXP7 276 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 GK5Q6ZS86 529 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SERPINA9Q86WD7 417 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CPNE9Q8IYJ1 553 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 PGAM4Q8N0Y7 254 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 HMGCLL1Q8TB92 370 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 JADE3Q92613 823 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 C3orf30Q96M34 536 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SERPINI1Q99574 410 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 S100A14Q9HCY8 104 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 TMCO1Q9UM00 188 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 LZTS1Q9Y250 596 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 DHRS7Q9Y394 339 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 DNAJC15Q9Y5T4 150 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ZNF106Q9H2Y7 1883 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CAPN8A6NHC0 703 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 IQCF5A8MTL0 148 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 PSMD12O00232 456 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CSPG5O95196 566 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 FGF19O95750 216 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ZNF7P17097 686 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 RPS3P23396 243 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 DDX6P26196 483 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 HLA-FP30511 346 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 STK19P49842 368 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ATP4BP51164 291 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SNRPD1P62314 119 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 LCP2Q13094 533 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ART3Q13508 389 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 PTK2BQ14289 1009 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CMPK2Q5EBM0 449 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 TCHHL1Q5QJ38 904 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SNX20Q7Z614 316 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 GPSM1Q86YR5 675 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 ISG20Q96AZ6 181 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CCDC124Q96CT7 223 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 PDLIM5Q96HC4 596 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 NAF1Q96HR8 494 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CDRT15Q96T59 188 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 SARS2Q9NP81 518 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 IL26Q9NPH9 171 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 NMRK1Q9NWW6 199 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 APPL1Q9UKG1 709 aa13.9□□□□□ -0.18
RAB3IP-216ENST00000552199 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 MOSPD3O75425 235 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 PRAMEF1O95521 474 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 ENO3P13929 434 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 BPIP17213 487 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 PTPN2P17706 415 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 CA5AP35218 305 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 BMPR1AP36894 532 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 HK3P52790 923 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 FOXA1P55317 472 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 FASTKQ14296 549 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 MAPRE2Q15555 327 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 MYLK3Q32MK0 819 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 AGKQ53H12 422 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 BNC2Q6ZN30 1099 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 ZSWIM9Q86XI8 627 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 TMEM25Q86YD3 366 aa13.89□□□□□ -0.19
RAB3IP-216ENST00000552199 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms