RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 GLIS1Q8NBF1 620 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 GRK7Q8WTQ7 553 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 SCG3Q8WXD2 468 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 CNDP2Q96KP4 475 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 CARS2Q9HA77 564 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 CYP4F12Q9HCS2 524 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 MRPL40Q9NQ50 206 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 EIF2B3Q9NR50 452 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 TRNAU1APQ9NX07 287 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 NCKIPSDQ9NZQ3 722 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 VPS18Q9P253 973 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 RNF14Q9UBS8 474 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 CNOT6Q9ULM6 557 aaKnown RBP17.19■□□□□ 0.34
CDK4-208ENST00000551706 DOLKQ9UPQ8 538 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 ARL5AQ9Y689 179 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 ZNF462Q96JM2 2506 aa17.19■□□□□ 0.34
CDK4-208ENST00000551706 GPR89AB7ZAQ6 455 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 AP3B1O00203 1094 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 TRIM38O00635 465 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 ATXN7O15265 892 aaPredicted RBP17.18■□□□□ 0.34
CDK4-208ENST00000551706 ASMTLO95671 621 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 ANXA6P08133 673 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 GPR89BP0CG08 455 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 GIMD1P0DJR0 217 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 HADHAP40939 763 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 C1orf61Q13536 156 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 ITGA9Q13797 1035 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 ZCCHC8Q6NZY4 707 aaKnown RBP17.18■□□□□ 0.34
CDK4-208ENST00000551706 PPP1R21Q6ZMI0 780 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 PHYKPLQ8IUZ5 450 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 DNAAF3Q8N9W5 541 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 FAM181AQ8N9Y4 354 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 GLYATL1Q969I3 302 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 SCARF2Q96GP6 870 aaPredicted RBP17.18■□□□□ 0.34
CDK4-208ENST00000551706 VPS35Q96QK1 796 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 CLPBQ9H078 707 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 RMI1Q9H9A7 625 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 IL26Q9NPH9 171 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 SMARCAL1Q9NZC9 954 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 APPL1Q9UKG1 709 aa17.18■□□□□ 0.34
CDK4-208ENST00000551706 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.17■□□□□ 0.34
CDK4-208ENST00000551706 GLYATL1P3A0A0U1RQE8 302 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 SIGLEC6O43699 453 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 SLC25A14O95258 325 aaPredicted RBP17.17■□□□□ 0.34
CDK4-208ENST00000551706 CKMT2P17540 419 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 PAFAH1B1P43034 410 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 ABCG1P45844 678 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 POLD2P49005 469 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 ETF1P62495 437 aaKnown RBP17.17■□□□□ 0.34
CDK4-208ENST00000551706 BASP1P80723 227 aaKnown RBP17.17■□□□□ 0.34
CDK4-208ENST00000551706 CDK16Q00536 496 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 PEX6Q13608 980 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 LAMB3Q13751 1172 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 PROX2Q3B8N5 592 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 TTC27Q6P3X3 843 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 DOK6Q6PKX4 331 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 TRIM74Q86UV6 250 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 OR4K2Q8NGD2 314 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 GLMNQ92990 594 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 CAAP1Q9H8G2 361 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 TRIM39Q9HCM9 518 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 SUFUQ9UMX1 484 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 TMEM98Q9Y2Y6 226 aa17.17■□□□□ 0.34
CDK4-208ENST00000551706 COL5A1P20908 1838 aaPredicted RBP17.17■□□□□ 0.34
CDK4-208ENST00000551706 TRABD2BA6NFA1 517 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 YY2O15391 372 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 LDB2O43679 373 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 BUD23O43709 281 aaKnown RBP17.16■□□□□ 0.34
CDK4-208ENST00000551706 KRT14P02533 472 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 CDK4P11802 303 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 GNPDA1P46926 289 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 DUSP3P51452 185 aaPredicted RBP17.16■□□□□ 0.34
CDK4-208ENST00000551706 ZNF140P52738 457 aaPredicted RBP17.16■□□□□ 0.34
CDK4-208ENST00000551706 ILF3Q12906 894 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDK4-208ENST00000551706 DEFB133Q30KQ1 61 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 ATP13A5Q4VNC0 1218 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 C6orf132Q5T0Z8 1188 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 KCTD16Q68DU8 428 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 FAM151BQ6UXP7 276 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 GALNT13Q8IUC8 556 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 CREG2Q8IUH2 290 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 OR52K1Q8NGK4 314 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 CAPZA3Q96KX2 299 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 GSDMCQ9BYG8 508 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 TMEM168Q9H0V1 697 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 CASS4Q9NQ75 786 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 PCDHGA1Q9Y5H4 931 aa17.16■□□□□ 0.34
CDK4-208ENST00000551706 OAS3Q9Y6K5 1087 aaKnown RBP17.16■□□□□ 0.34
CDK4-208ENST00000551706 VEGFDO43915 354 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 FUCA1P04066 466 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 TPH1P17752 444 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 TPSB2P20231 275 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 CASQ1P31415 396 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 RPIAP49247 311 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 DAB2P98082 770 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 GPS1Q13098 491 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 ILKQ13418 452 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 LRP8Q14114 963 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 POU6F1Q14863 301 aa17.15■□□□□ 0.34
CDK4-208ENST00000551706 TPSAB1Q15661 275 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms