RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 FAXCQ5TGI0 409 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 DCP1BQ8IZD4 617 aaKnown RBP20.91■□□□□ 0.94
NPAS3-210ENST00000551492 FAM109AQ8N4B1 249 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 PCDH19Q8TAB3 1148 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 JPH3Q8WXH2 748 aaPredicted RBP20.91■□□□□ 0.94
NPAS3-210ENST00000551492 SMPD4Q9NXE4 827 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 FSCN2O14926 492 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 ACOX3O15254 700 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 CASP3P42574 277 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 HSPA13P48723 471 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 ARHGDIAP52565 204 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 STX3Q13277 289 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 SHHQ15465 462 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 TFDP3Q5H9I0 405 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 RAB41Q5JT25 222 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 IZUMO3Q5VZ72 239 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 CENPUQ71F23 418 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 CPA6Q8N4T0 437 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 C1QTNF7Q9BXJ2 289 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 TKTL2Q9H0I9 626 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 MTMR10Q9NXD2 777 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 DNMT3LQ9UJW3 386 aa20.91■□□□□ 0.94
NPAS3-210ENST00000551492 SLC9A3R1O14745 358 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 NOL3O60936 208 aaKnown RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 KLF1Q13351 362 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 ADAMTSL2Q86TH1 951 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 TCAIMQ8N3R3 496 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 ZNF420Q8TAQ5 688 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 FBXO32Q969P5 355 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 CHID1Q9BWS9 393 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 CAB39Q9Y376 341 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 TMEM189-UBE2V1I3L0A0 370 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 SYN3O14994 580 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 CCNKO75909 580 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 TP53P04637 393 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 IFI30P13284 250 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 EEF1DP29692 281 aaKnown RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 POLR2GP62487 172 aaKnown RBP eCLIP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 SLC10A2Q12908 348 aaPredicted RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 ZNF846Q147U1 533 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 SMAD1Q15797 465 aaKnown RBP20.9■□□□□ 0.94
NPAS3-210ENST00000551492 SLC25A52Q3SY17 297 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 SLX4IPQ5VYV7 408 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 FRMD7Q6ZUT3 714 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 BANPQ8N9N5 519 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 HM13Q8TCT9 377 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 ZFP90Q8TF47 636 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 WWP1Q9H0M0 922 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 GKN1Q9NS71 199 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 SPG21Q9NZD8 308 aa20.9■□□□□ 0.94
NPAS3-210ENST00000551492 MUC3AQ02505 3323 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 ATP8B3O60423 1300 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 KRT8P05787 483 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 CA3P07451 260 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 CNPP09543 421 aaKnown RBP20.89■□□□□ 0.94
NPAS3-210ENST00000551492 CD1EP15812 388 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 CTNNB1P35222 781 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 HTR2BP41595 481 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 SLC22A17Q8WUG5 538 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 MARC2Q969Z3 335 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 CELF6Q96J87 481 aaKnown RBP20.89■□□□□ 0.94
NPAS3-210ENST00000551492 NPY6RQ99463 290 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 USB1Q9BQ65 265 aaKnown RBP20.89■□□□□ 0.94
NPAS3-210ENST00000551492 C20orf27Q9GZN8 174 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 PIH1D1Q9NWS0 290 aaKnown RBP20.89■□□□□ 0.94
NPAS3-210ENST00000551492 ACTR3BQ9P1U1 418 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 VPS4AQ9UN37 437 aa20.89■□□□□ 0.94
NPAS3-210ENST00000551492 BPTFQ12830 3046 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 A8MV72 311 aaPredicted RBP20.89■□□□□ 0.93
NPAS3-210ENST00000551492 FADS2P1A8MWK0 482 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 PRRG1O14668 218 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 RNASEH2AO75792 299 aaKnown RBP20.89■□□□□ 0.93
NPAS3-210ENST00000551492 PAHP00439 452 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 CBLP22681 906 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 L1CAMP32004 1257 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 TAP1Q03518 808 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 GPR17Q13304 367 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 PLD1Q13393 1074 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 RCOR2Q8IZ40 523 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 NIPA2Q8N8Q9 360 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 KCTD13Q8WZ19 329 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 DMRTB1Q96MA1 342 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 APOL5Q9BWW9 433 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 MIR1-1HGQ9H1L0 117 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 LRRC19Q9H756 370 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 TOR4AQ9NXH8 423 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 MPP6Q9NZW5 540 aa20.89■□□□□ 0.93
NPAS3-210ENST00000551492 PTPRDP23468 1912 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 PRR23AA6NEV1 266 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 LPXNO60711 386 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 RNGTTO60942 597 aaKnown RBP20.88■□□□□ 0.93
NPAS3-210ENST00000551492 RFPL2O75678 378 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 BST1Q10588 318 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 ANKS3Q6ZW76 656 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 CIR1Q86X95 450 aaPredicted RBP20.88■□□□□ 0.93
NPAS3-210ENST00000551492 TDRPQ86YL5 185 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 UNC45BQ8IWX7 931 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 PQLC3Q8N755 202 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 FAM71DQ8N9W8 422 aa20.88■□□□□ 0.93
NPAS3-210ENST00000551492 SH3KBP1Q96B97 665 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms