RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SLC11A2P49281 568 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 VAMP7P51809 220 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 SLC7A9P82251 487 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 SRSF5Q13243 272 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 NFE2Q16621 373 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 RAB41Q5JT25 222 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 OTUD1Q5VV17 481 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ISM2Q6H9L7 571 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 RGS7BPQ6MZT1 257 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 VSTM1Q6UX27 236 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 RBM43Q6ZSC3 357 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ACOT1Q86TX2 421 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 FAM186BQ8IYM0 893 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 CEP57L1Q8IYX8 460 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ZBTB34Q8NCN2 500 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 SLC2A14Q8TDB8 520 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ATG4AQ8WYN0 398 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 PIWIL1Q96J94 861 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 MOGAT1Q96PD6 335 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 TRMT61BQ9BVS5 477 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 GPR88Q9GZN0 384 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 EBF3Q9H4W6 596 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ZMAT3Q9HA38 289 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ZFP14Q9HCL3 533 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 TMEM8AQ9HCN3 771 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 SIX2Q9NPC8 291 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ACP6Q9NPH0 428 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 CYTH4Q9UIA0 394 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 NDRG4Q9ULP0 352 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ARHGAP26Q9UNA1 814 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 ACACBO00763 2458 aa5.08□□□□□ -1.6
SCAF11-214ENST00000550893 DSPP15924 2871 aaKnown RBP5.08□□□□□ -1.6
SCAF11-214ENST00000550893 C10orf142B7Z368 130 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 H0YIZ8 118 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 K7EQS6 105 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 O00370 1275 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF197O14709 1029 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 IKBKBO14920 756 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 PMM2O15305 246 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TBX18O95935 607 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 FYNP06241 537 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 IL6RP08887 468 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CSH1P0DML2 217 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CSH2P0DML3 217 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 KITP10721 976 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CDC25CP30307 473 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 ELF1P32519 619 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 GNL1P36915 607 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 PIK3CAP42336 1068 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 RPL34P49207 117 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TUFMP49411 452 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 MXI1P50539 228 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 ARFIP2P53365 341 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 MYL7Q01449 175 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TSPY1Q01534 308 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SRSF4Q08170 494 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SMARCB1Q12824 385 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TAF10Q12962 218 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 E2F2Q14209 437 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 MTF1Q14872 753 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 PON2Q15165 354 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 DPCR1Q3MIW9 517 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF667Q5HYK9 610 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CYP4A22Q5TCH4 519 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 DENND5BQ6ZUT9 1274 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 APTXQ7Z2E3 356 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SPATA2LQ8IUW3 424 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SCN4BQ8IWT1 228 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 DCP1BQ8IZD4 617 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 DCLK2Q8N568 766 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 GOLGA5Q8TBA6 731 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 GPT2Q8TD30 523 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 BPIFB1Q8TDL5 484 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 OSCP1Q8WVF1 389 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 DDB2Q92466 427 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 NDRG1Q92597 394 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SYAP1Q96A49 352 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 GSDMAQ96QA5 445 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 HNRNPABQ99729 332 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TRIM54Q9BYV2 358 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 LRRC27Q9C0I9 530 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CD93Q9NPY3 652 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 GKN1Q9NS71 199 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 DLL3Q9NYJ7 618 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SERGEFQ9UGK8 458 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CLEC4EQ9ULY5 219 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 NDRG2Q9UN36 371 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 MAGED2Q9UNF1 606 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 SHOC2Q9UQ13 582 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 CNTN6Q9UQ52 1028 aa5.07□□□□□ -1.6
SCAF11-214ENST00000550893 MRPS17Q9Y2R5 130 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 TPRP12270 2363 aaKnown RBP5.07□□□□□ -1.6
SCAF11-214ENST00000550893 KNL1Q8NG31 2342 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PTPRBP23467 1997 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ANKRD36A6QL64 1941 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 LRP4O75096 1905 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 A0A1W2PPL8 197 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 A8MXQ7 604 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 TARM1B6A8C7 271 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms