RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 NUAK1O60285 661 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 PROSCO94903 275 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 ACP5P13686 325 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 F3P13726 295 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 SLC2A4P14672 509 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 MAP4P27816 1152 aaKnown RBP21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 POLE2P56282 527 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 TAS2R40P59535 323 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 FANCCQ00597 558 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 KIR2DS5Q14953 304 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 CEACAM20Q6UY09 585 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 NLGN4XQ8N0W4 816 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 NLGN4YQ8NFZ3 816 aaPredicted RBP21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 CATSPER2Q96P56 530 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 CTRCQ99895 268 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 ZPBPQ9BS86 351 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 MLPHQ9BV36 600 aaPredicted RBP21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 CARD9Q9H257 536 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 DTLQ9NZJ0 730 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 ZFC3H1O60293 1989 aaKnown RBP21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 OR5K4A6NMS3 321 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 GRID2O43424 1007 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 JCHAINP01591 159 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 MAN1A1P33908 653 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CD86P42081 329 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CLCNKAP51800 687 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 KCNAB2Q13303 367 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CAVIN1Q6NZI2 390 aaKnown RBP21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 TIPARPQ7Z3E1 657 aaKnown RBP21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CCDC13Q8IYE1 715 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CNTD1Q8N815 330 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CCNYQ8ND76 341 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CCHCR1Q8TD31 782 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CPLX3Q8WVH0 158 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 EID2BQ96D98 161 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 IQCDQ96DY2 449 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 EPB41L1Q9H4G0 881 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 ATXN10Q9UBB4 475 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 CPNE7Q9UBL6 633 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 TMEM184BQ9Y519 407 aaPredicted RBP21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 ADGRG1Q9Y653 693 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 NAV2Q8IVL1 2488 aa21.45■■□□□ 1.02
SMARCC2-210ENST00000550519 LOC101059948A0A1B0GTJ6 334 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 SNX2O60749 519 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 KRT7P08729 469 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 CCR10P46092 362 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 GPN2Q9H9Y4 310 aaPredicted RBP21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 APMAPQ9HDC9 416 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 CTTNBP2NLQ9P2B4 639 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 UVRAGQ9P2Y5 699 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 LUC7L2Q9Y383 392 aaKnown RBP21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 PTPN13Q12923 2485 aa21.44■■□□□ 1.02
SMARCC2-210ENST00000550519 LILRA5A6NI73 299 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 KCNK1O00180 336 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 NKX2-8O15522 239 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 ZNF8P17098 575 aaPredicted RBP21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 UBASH3AP57075 661 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 UBE2IP63279 158 aaKnown RBP21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 IFI35P80217 286 aaPredicted RBP21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 TLE1Q04724 770 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 PPIDQ08752 370 aaKnown RBP21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 ABHD18Q0P651 414 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 PHYKPLQ8IUZ5 450 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 AVL9Q8NBF6 648 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 KIAA1143Q96AT1 154 aaPredicted RBP21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 EFHD1Q9BUP0 239 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 TBC1D10AQ9BXI6 508 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 ADGRE3Q9BY15 652 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 PRDM8Q9NQV8 689 aa21.43■■□□□ 1.02
SMARCC2-210ENST00000550519 STK17BO94768 372 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 GYPCP04921 128 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 MAPK9P45984 424 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 MN1Q10571 1320 aaPredicted RBP21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 ZBTB17Q13105 803 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 PTRH1Q86Y79 214 aaKnown RBP21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 PLXDC1Q8IUK5 500 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 UNC5BQ8IZJ1 945 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 RAPGEF5Q92565 580 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 RNF157Q96PX1 679 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 PLEKHG4BQ96PX9 1271 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 TRIB3Q96RU7 358 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 TRIT1Q9H3H1 467 aaKnown RBP21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 UCK1Q9HA47 277 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 ZFYVE1Q9HBF4 777 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 CBX8Q9HC52 389 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 TRIM39Q9HCM9 518 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 ARFGAP3Q9NP61 516 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 SIDT1Q9NXL6 827 aaKnown RBP21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 KLHL3Q9UH77 587 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 LCMT1Q9UIC8 334 aa21.42■■□□□ 1.02
SMARCC2-210ENST00000550519 GPR89AB7ZAQ6 455 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 POLR1CO15160 346 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 SLC25A14O95258 325 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 DLGAP3O95886 979 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 ANKRD34CP0C6C1 535 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 GPR89BP0CG08 455 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 XRCC1P18887 633 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 KDELR1P24390 212 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 DCDC1P59894 354 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms