RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PTPN5P54829 565 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 MSS51Q4VC12 460 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 COLEC12Q5KU26 742 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 LCN1P1Q5VSP4 162 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 CLHC1Q8NHS4 586 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 PLEKHO2Q8TD55 490 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 FCGR1BQ92637 280 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 GBA3Q9H227 469 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 PCDHB5Q9Y5E4 795 aa15.72■□□□□ 0.11
RBFOX1-212ENST00000550418 PIP5K1BO14986 540 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 C8BP07358 591 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 CD36P16671 472 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 YWHAQP27348 245 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 ERICH5Q6P6B1 374 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 RASSF6Q6ZTQ3 369 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 MARVELD2Q8N4S9 558 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 BBS4Q96RK4 519 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 MED28Q9H204 178 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 EIF2B3Q9NR50 452 aaKnown RBP15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 COMMD9Q9P000 198 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 VPS4AQ9UN37 437 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 SH3PXD2BA1X283 911 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 C2CD4BA6NLJ0 364 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 M0R2N6 131 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 CCRL2O00421 344 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 CATP04040 527 aaKnown RBP15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 SLC6A2P23975 617 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 THPOP40225 353 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 ABL2P42684 1182 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 STARP49675 285 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 ZNF280DQ6N043 979 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 TRIM40Q6P9F5 258 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 SLC22A16Q86VW1 577 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 NIPA2Q8N8Q9 360 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 TRPV1Q8NER1 839 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 COPS4Q9BT78 406 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 SPACA6W5XKT8 324 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 FAM92AA1XBS5 289 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 FAM159BA6NKW6 160 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 POMCP01189 267 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 FABP3P05413 133 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 ATF4P18848 351 aaPredicted RBP15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 MYL9P24844 172 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 NRLP54845 237 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 USP43Q70EL4 1123 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 TMEM110Q86TL2 294 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 DNAJB3Q8WWF6 145 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 ISOC1Q96CN7 298 aa15.71■□□□□ 0.11
RBFOX1-212ENST00000550418 MTHFD1P11586 935 aaKnown RBP15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 NMBRP28336 390 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 LIN54Q6MZP7 749 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 GPR65Q8IYL9 337 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 OR10A6Q8NH74 314 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 MIPEPQ99797 713 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 KIFC1Q9BW19 673 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 ZYG11BQ9C0D3 744 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 ZSCAN32Q9NX65 697 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 PFDN2Q9UHV9 154 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 TEX264Q9Y6I9 313 aa15.71■□□□□ 0.1
RBFOX1-212ENST00000550418 IGLV3-22A0A075B6J6 115 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 ZW10O43264 779 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 C9P02748 559 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 CKMP06732 381 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 TFPTP0C1Z6 253 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 LPOP22079 712 aaPredicted RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 AQP1P29972 269 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 PTPN9P43378 593 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 BCL2L1Q07817 233 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 PUDPQ08623 228 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 IKBKEQ14164 716 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 MYLK3Q32MK0 819 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 CXXC5Q7LFL8 322 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 LRRC52Q8N7C0 313 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 MARCH2Q9P0N8 246 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 HES2Q9Y543 173 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 H7C4K7 107 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 TSPAN4O14817 238 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 CYP4F8P98187 520 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 GALNT3Q14435 633 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 TEFMQ96QE5 360 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 GFM1Q96RP9 751 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 NKIRAS2Q9NYR9 191 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 FBP2O00757 339 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 TCF4P15884 667 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 KIR3DL1P43629 444 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 ZNF460Q14592 562 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 PLEKHG6Q3KR16 790 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 EPGNQ6UW88 154 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 ERMP1Q7Z2K6 904 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 TRMT11Q7Z4G4 463 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 TRPV3Q8NET8 790 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 CMASQ8NFW8 434 aaPredicted RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 CDK5RAP1Q96SZ6 601 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 DUSP16Q9BY84 665 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 LRTM1Q9HBL6 345 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 BAIAP2Q9UQB8 552 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms