RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PRLP01236 227 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 ATP1A1P05023 1023 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 XRCC1P18887 633 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 SERPINB6P35237 376 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 NOP2P46087 812 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 PPM1FP49593 454 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 UBE2IP63279 158 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 HENMT1Q5T8I9 393 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 C6orf15Q6UXA7 325 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 APLFQ8IW19 511 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 CCDC13Q8IYE1 715 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 ATPAF2Q8N5M1 289 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 AOPEPQ8N6M6 819 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 TEKT4Q8WW24 435 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 MAML1Q92585 1016 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 C9orf72Q96LT7 481 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 SMIM14Q96QK8 99 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 POLR1EQ9GZS1 481 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 FAM83DQ9H4H8 585 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 NT5MQ9NPB1 228 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 PRDM8Q9NQV8 689 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 AIPL1Q9NZN9 384 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 CNOT8Q9UFF9 292 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 KCND3Q9UK17 655 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 PRKAB1Q9Y478 270 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 PCDHGA6Q9Y5G7 932 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 OAS3Q9Y6K5 1087 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 SCINQ9Y6U3 715 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 MN1Q10571 1320 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 K7EM74 188 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 MATN3O15232 486 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 GRID2O43424 1007 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 NUAK1O60285 661 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 CLDN7O95471 211 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 FURINP09958 794 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 RARAP10276 462 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 FGF5P12034 268 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ZNF28P17035 718 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 CDK11BP21127 795 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 IL4RP24394 825 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 DLSTP36957 453 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 SPINT3P49223 89 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 EPHB1P54762 984 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ATP1A1-AS1Q5TC04 95 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 RBM43Q6ZSC3 357 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ASB18Q6ZVZ8 466 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 FAM71BQ8TC56 605 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 TSGA13Q96PP4 275 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 PLEKHG4BQ96PX9 1271 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 TBC1D10AQ9BXI6 508 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ULBP3Q9BZM4 244 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ZMYND15Q9H091 742 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ISCUQ9H1K1 167 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 CARD9Q9H257 536 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 TRIM39Q9HCM9 518 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 OGFRQ9NZT2 677 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 RCOR3Q9P2K3 495 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 PADI1Q9ULC6 663 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 POLHQ9Y253 713 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 KCNK6Q9Y257 313 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 MRPS18BQ9Y676 258 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-207ENST00000550051 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ICE1Q9Y2F5 2266 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 UTP20O75691 2785 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 FADS2P1A8MWK0 482 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ANKRD66B4E2M5 251 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 GPR89AB7ZAQ6 455 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 DDX3XO00571 662 aaKnown RBP eCLIP9.72□□□□□ -0.853e-8■■■□□ 18.8
TRAFD1-207ENST00000550051 SNX2O60749 519 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 CREG1O75629 220 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 KRT7P08729 469 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 GPR89BP0CG08 455 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 MYBL1P10243 752 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ACP5P13686 325 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 TCF4P15884 667 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 CA4P22748 312 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 CCNCP24863 283 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 PRKCIP41743 596 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 PMS2P54278 862 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 MLLT10P55197 1068 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 MYL5Q02045 173 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 FOXM1Q08050 763 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ITKQ08881 620 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 GALNT2Q10471 571 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ERV3-1Q14264 604 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 SMTNL2Q2TAL5 461 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ANKRD20A8PQ5CZ79 823 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ABRAXAS1Q6UWZ7 409 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 TMEM26Q6ZUK4 368 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 ZNF571Q7Z3V5 609 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 NIPA2Q8N8Q9 360 aa9.72□□□□□ -0.85
TRAFD1-207ENST00000550051 GALNT6Q8NCL4 622 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms