RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SERPINB6P35237 376 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 STAT5AP42229 794 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 EPHB1P54762 984 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 GSDMDP57764 484 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 ABHD18Q0P651 414 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
SSH1-208ENST00000548522 CPNE8Q86YQ8 564 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 LPCAT1Q8NF37 534 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 APOBEC4Q8WW27 367 aaKnown RBP16.29■□□□□ 0.2
SSH1-208ENST00000548522 POLR1EQ9GZS1 481 aaKnown RBP16.29■□□□□ 0.2
SSH1-208ENST00000548522 PRDM8Q9NQV8 689 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 FBXO8Q9NRD0 319 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 OGFRQ9NZT2 677 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 VPS18Q9P253 973 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 TP53TG5Q9Y2B4 290 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 MAN2B2Q9Y2E5 1009 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 MN1Q10571 1320 aaPredicted RBP16.28■□□□□ 0.2
SSH1-208ENST00000548522 FURINP09958 794 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 GZMAP12544 262 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 NIPAL4Q0D2K0 466 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 LACTB2Q53H82 288 aaPredicted RBP16.28■□□□□ 0.2
SSH1-208ENST00000548522 BOLA3Q53S33 107 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 HENMT1Q5T8I9 393 aaKnown RBP16.28■□□□□ 0.2
SSH1-208ENST00000548522 ALG1LQ6GMV1 187 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 TMEM135Q86UB9 458 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 NLRP8Q86W28 1048 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 ARRDC2Q8TBH0 407 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 SCHIP1Q9P0W5 487 aaPredicted RBP16.28■□□□□ 0.2
SSH1-208ENST00000548522 CPNE7Q9UBL6 633 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 RPS6KL1Q9Y6S9 549 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 NOTCH2Q04721 2471 aa16.28■□□□□ 0.2
SSH1-208ENST00000548522 UNC79Q9P2D8 2635 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 C1orf232A0A0U1RR37 186 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 POLR1CO15160 346 aaPredicted RBP16.27■□□□□ 0.2
SSH1-208ENST00000548522 MTSS1O43312 755 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 HLA-DQB2P05538 268 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 PYGLP06737 847 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 GP1BBP13224 206 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 F3P13726 295 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 TCN2P20062 427 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 GARSP41250 739 aaKnown RBP16.27■□□□□ 0.2
SSH1-208ENST00000548522 PRKCIP41743 596 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 EPHA4P54764 986 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 UBE2IP63279 158 aaKnown RBP16.27■□□□□ 0.2
SSH1-208ENST00000548522 SH3BP2P78314 561 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 GALNT2Q10471 571 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 NCBP2-AS2Q69YL0 99 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 LYSMD3Q7Z3D4 306 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 TEKT4Q8WW24 435 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 MAML1Q92585 1016 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 ZPBPQ9BS86 351 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 HERPUD2Q9BSE4 406 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 ULBP3Q9BZM4 244 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 BRD8Q9H0E9 1235 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 STN1Q9H668 368 aaKnown RBP16.27■□□□□ 0.2
SSH1-208ENST00000548522 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.2
SSH1-208ENST00000548522 DTLQ9NZJ0 730 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 AIPL1Q9NZN9 384 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 KCNMB2Q9Y691 235 aa16.27■□□□□ 0.2
SSH1-208ENST00000548522 MYBL1P10243 752 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 ZNF8P17098 575 aaPredicted RBP16.26■□□□□ 0.19
SSH1-208ENST00000548522 TYRP1P17643 537 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 MAN1A1P33908 653 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 SPINT3P49223 89 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 MLLT10P55197 1068 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 FOXM1Q08050 763 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 KRT81Q14533 505 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 PLA2G4EQ3MJ16 856 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 HIST2H2BCQ6DN03 193 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 SLC9B2Q86UD5 537 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 NDUFAF2Q8N183 169 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 GALNT6Q8NCL4 622 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 MIB2Q96AX9 1013 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 EID2BQ96D98 161 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 ELMO2Q96JJ3 720 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 PLEKHG4BQ96PX9 1271 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 ISCUQ9H1K1 167 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 PCDH9Q9HC56 1237 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 MRPL47Q9HD33 250 aaKnown RBP16.26■□□□□ 0.19
SSH1-208ENST00000548522 SPTLC3Q9NUV7 552 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 RBM22Q9NW64 420 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSH1-208ENST00000548522 ATXN10Q9UBB4 475 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 ADGRG1Q9Y653 693 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 SLC30A1Q9Y6M5 507 aa16.26■□□□□ 0.19
SSH1-208ENST00000548522 KIR2DS5A0A0G2JLQ3 304 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 A0A0G2JNG1 304 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 LILRA5A6NI73 299 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 KIR2DS3K7RE56 304 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 GRID2O43424 1007 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 ANKRD34CP0C6C1 535 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 GJC1P36383 396 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 DLSTP36957 453 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 LEPRP48357 1165 aaKnown RBP16.25■□□□□ 0.19
SSH1-208ENST00000548522 SEPHS1P49903 392 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 ARSEP51690 589 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 TERF1P54274 439 aa16.25■□□□□ 0.19
SSH1-208ENST00000548522 DPYSL3Q14195 570 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms