RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 KRT1P04264 644 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PYGLP06737 847 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 MMP2P08253 660 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PIRTP0C851 137 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 CCL4P13236 92 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZFXP17010 805 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 NOP2P46087 812 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 GPR3P46089 330 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SPINT3P49223 89 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 RPL26P61254 145 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 IFI35P80217 286 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 RHDQ02161 417 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 CFHR1Q03591 330 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PPIDQ08752 370 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SRSF6Q13247 344 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 LY6DQ14210 128 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 C16orf72Q14CZ0 275 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PDK1Q15118 436 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF648Q5T619 568 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ALS2CLQ60I27 953 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ALG1LQ6GMV1 187 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC70Q6NSX1 233 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 INO80CQ6PI98 192 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF765Q7L2R6 523 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 LYSMD3Q7Z3D4 306 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF605Q86T29 641 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 NT5DC3Q86UY8 548 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF761Q86XN6 746 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 VSTM4Q8IW00 320 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SLITRK4Q8IW52 837 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 RHOT2Q8IXI1 618 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PLD5Q8N7P1 536 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZSCAN1Q8NBB4 408 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 LSM14AQ8ND56 463 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SPATA22Q8NHS9 363 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 JPH3Q8WXH2 748 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SCARF2Q96GP6 870 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 AHCYL2Q96HN2 611 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 COX14Q96I36 57 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 WDR24Q96S15 920 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SLC38A3Q99624 504 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 NUDT22Q9BRQ3 303 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ZMYND15Q9H091 742 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ARFGAP3Q9NP61 516 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 KCNK4Q9NYG8 393 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 UBP1Q9NZI7 540 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PKD2L2Q9NZM6 624 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 FOXJ2Q9P0K8 574 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SAE1Q9UBE0 346 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 DNPEPQ9ULA0 475 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 RPL26L1Q9UNX3 145 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SHOC2Q9UQ13 582 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PCDHB11Q9Y5F2 797 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PCYT1BQ9Y5K3 369 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 OAS3Q9Y6K5 1087 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ASXL3Q9C0F0 2248 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 IGHV1OR21-1A0A087WYE8 117 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 IGHV5-10-1A0A0J9YXX1 117 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 RGSL1A5PLK6 1076 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 A8MU76 341 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 FADS2P1A8MWK0 482 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 C9orf172C9J069 976 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 AKR1B15C9JRZ8 316 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-211ENST00000547950 PPP1R12AO14974 1030 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-211ENST00000547950 SPOPO43791 374 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 PMPCBO75439 489 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 SLC25A14O95258 325 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-211ENST00000547950 FGF3P11487 239 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ACP5P13686 325 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 COMTP21964 271 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 CSTF2P33240 577 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCAF11-211ENST00000547950 MAGEA1P43355 309 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 MAPK9P45984 424 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 LIMK2P53671 638 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 NFATC2Q13469 925 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 LRP8Q14114 963 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 SNAP47Q5SQN1 464 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 MANEAQ5SRI9 462 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 TMEM164Q5U3C3 297 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 LRRC38Q5VT99 294 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 KAZNQ674X7 775 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 SLC9A4Q6AI14 798 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 MFSD7Q6UXD7 560 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF438Q7Z4V0 828 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 VASH2Q86V25 355 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 RHOT1Q8IXI2 618 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 NCSTNQ92542 709 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 EID2BQ96D98 161 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 IMP4Q96G21 291 aaKnown RBP6.64□□□□□ -1.35
SCAF11-211ENST00000547950 CCDC74BQ96LY2 380 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 LYSMD1Q96S90 227 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ANP32EQ9BTT0 268 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 SPATA16Q9BXB7 569 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 GPR63Q9BZJ6 419 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 BRD8Q9H0E9 1235 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 OR2AG1Q9H205 316 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 ZFYVE1Q9HBF4 777 aa6.64□□□□□ -1.35
SCAF11-211ENST00000547950 DDX56Q9NY93 547 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms