RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 PRAMEF11O60813 436 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 CEACAM4O75871 244 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 CYP1A1P04798 512 aaPredicted RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 FGF5P12034 268 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 UNGP13051 313 aaPredicted RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 SDC4P31431 198 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 ETV3P41162 512 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 MAPK9P45984 424 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 NSFP46459 744 aaKnown RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 SH3BP2P78314 561 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 CNGA3Q16281 694 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 CDO1Q16878 200 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 C15orf59Q2T9L4 293 aaPredicted RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 CCDC14Q49A88 953 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSH1-205ENST00000546812 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 RAET1GQ6H3X3 334 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 IYDQ6PHW0 289 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 DOK6Q6PKX4 331 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 SLC9B2Q86UD5 537 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 CCDC185Q8N715 623 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 TSEN2Q8NCE0 465 aaKnown RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 MSANTD4Q8NCY6 345 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 RXFP2Q8WXD0 754 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 SNRNP40Q96DI7 357 aaKnown RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 DTD2Q96FN9 168 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 ELMO2Q96JJ3 720 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 OR6C1Q96RD1 312 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 GPR87Q9BY21 358 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 UNKQ9C0B0 810 aaKnown RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 BRD8Q9H0E9 1235 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 STN1Q9H668 368 aaKnown RBP9.16□□□□□ -0.94
SSH1-205ENST00000546812 LNPEPQ9UIQ6 1025 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 TMEM98Q9Y2Y6 226 aa9.16□□□□□ -0.94
SSH1-205ENST00000546812 DNHD1Q96M86 4753 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 GOLGA6CA6NDK9 693 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 GOLGA6BA6NDN3 693 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 ANKUB1A6NFN9 424 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 GOLGA6L6A8MZA4 724 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 SPAG6O75602 509 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 PALMO75781 387 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 HEXIM1O94992 359 aaKnown RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 C9P02748 559 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 GOLGA6DP0CG33 693 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 MMP8P22894 467 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 PTPN4P29074 926 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 DPTQ07507 201 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 NSUN2Q08J23 767 aaKnown RBP eCLIP9.15□□□□□ -0.94
SSH1-205ENST00000546812 DENND2CQ68D51 928 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 SP5Q6BEB4 398 aaPredicted RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 Q6ZVL8 140 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 MON1BQ7L1V2 547 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 STRADAQ7RTN6 431 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 HSD11B1LQ7Z5J1 315 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 SYVN1Q86TM6 617 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 PHF13Q86YI8 300 aaPredicted RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 GALNT13Q8IUC8 556 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 RHOT1Q8IXI2 618 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 PYROXD2Q8N2H3 581 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 LZTR1Q8N653 840 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 RBMXL3Q8N7X1 1067 aaKnown RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 CENPIQ92674 756 aaPredicted RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 NTAN1Q96AB6 310 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 CHP1Q99653 195 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 DEF6Q9H4E7 631 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 RUBCNLQ9H714 662 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 LRRC19Q9H756 370 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 CATSPERBQ9H7T0 1116 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 SPTLC3Q9NUV7 552 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 ASF1BQ9NVP2 202 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 GOLGA6AQ9NYA3 693 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 IMPACTQ9P2X3 320 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 TBC1D29Q9UFV1 150 aa9.15□□□□□ -0.94
SSH1-205ENST00000546812 BZW2Q9Y6E2 419 aaKnown RBP9.15□□□□□ -0.94
SSH1-205ENST00000546812 A0A087X0T9 212 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 A0A1W2PQ67 120 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 C2CD4BA6NLJ0 364 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 SOD1P00441 154 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 FAM228BP0C875 321 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 VIPR1P32241 457 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 PTPN9P43378 593 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 GPR1P46091 355 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 SEPHS1P49903 392 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 GFERP55789 205 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 ITGA1P56199 1179 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 HDAC4P56524 1084 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 AP1S1P61966 158 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 RPS15P62841 145 aaKnown RBP9.14□□□□□ -0.95
SSH1-205ENST00000546812 PTP4A2Q12974 167 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 ELOAQ14241 798 aaKnown RBP9.14□□□□□ -0.95
SSH1-205ENST00000546812 ACAD10Q6JQN1 1059 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 ADAMTSL4Q6UY14 1074 aa9.14□□□□□ -0.95
SSH1-205ENST00000546812 MARK2Q7KZI7 788 aaKnown RBP9.14□□□□□ -0.95
SSH1-205ENST00000546812 SLFN11Q7Z7L1 901 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms