RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 CCNYL3P0C7X3 344 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 GPD2P43304 727 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 ZSWIM7Q19AV6 140 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SPPL2CQ8IUH8 684 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 PHYKPLQ8IUZ5 450 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 RBM15BQ8NDT2 890 aaKnown RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 TCF12Q99081 682 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 CLN6Q9NWW5 311 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 NFAT5O94916 1531 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SUV39H1O43463 412 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 ITGA2P17301 1181 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 C9orf64Q5T6V5 341 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
CHD4-211ENST00000544484 SLC47A1Q96FL8 570 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 MAGEH1Q9H213 219 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 CORO2BQ9UQ03 480 aa12.74□□□□□ -0.37
CHD4-211ENST00000544484 PPEF2O14830 753 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 METTL18O95568 372 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 MT-ND1P03886 318 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 CAPN1P07384 714 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 TSTD2Q5T7W7 516 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 C7orf61Q8IZ16 206 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 ENKURQ8TC29 256 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 RTKNQ9BST9 563 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 NID2Q14112 1375 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 H0YC42 278 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 GTPBP1O00178 669 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 GSC2O15499 205 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 SEC13P55735 322 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 FOLH1Q04609 750 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 LSM12Q3MHD2 195 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 TMEM63BQ5T3F8 832 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 SERPINA9Q86WD7 417 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 CPSF7Q8N684 471 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 NOL6Q9H6R4 1146 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 C8AP07357 584 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 COL6A2P12110 1019 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 PRG2P13727 222 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 BMP7P18075 431 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 ANXA8L1Q5VT79 327 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 IL23RQ5VWK5 629 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 CPNE9Q8IYJ1 553 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 CPA6Q8N4T0 437 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 TWNKQ96RR1 684 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 OSER1Q9NX31 292 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 DUS2Q9NX74 493 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 COQ4Q9Y3A0 265 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 SIN3BO75182 1162 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 NFATC1O95644 943 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 DBTP11182 482 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 TCF4P15884 667 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 PLEKHG4Q58EX7 1191 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 BROXQ5VW32 411 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 OR7A2PQ8NGA2 310 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 LRRC14BA6NHZ5 514 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 CLCQ05315 142 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 SIDT2Q8NBJ9 832 aaKnown RBP12.73□□□□□ -0.37
CHD4-211ENST00000544484 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 MKL2Q9ULH7 1088 aa12.73□□□□□ -0.37
CHD4-211ENST00000544484 UGT1A9O60656 530 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SCN2BO60939 215 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SERPINB7O75635 380 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 F7P08709 466 aaPredicted RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 POLR2JP52435 117 aaKnown RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 UGT2B15P54855 530 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 RPS24P62847 133 aaKnown RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 KLHL12Q53G59 568 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 CCNYL2Q5T2Q4 361 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 CLEC20AQ6ZU45 233 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ZNF781Q8N8C0 355 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 UGT1A7Q9HAW7 530 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 UGT1A10Q9HAW8 530 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 UGT1A8Q9HAW9 530 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 EHD3Q9NZN3 535 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SLC17A6Q9P2U8 582 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 TULP2O00295 520 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 MAT2AP31153 395 aaKnown RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 ITGADQ13349 1161 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 TXNRD3NBQ6F5E7 133 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 FITM2Q8N6M3 262 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 XAGE5Q8WWM1 108 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 CRISPLD1Q9H336 500 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 TXNRD2Q9NNW7 524 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 GKN1Q9NS71 199 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 GRHL1Q9NZI5 618 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms