RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 BIRC8Q96P09 236 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 GID8Q9NWU2 228 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 ANAPC2Q9UJX6 822 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 CORINQ9Y5Q5 1042 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 PTGES3LE9PB15 166 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 DUSP11O75319 330 aaKnown RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 PARNO95453 639 aaKnown RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 LDLRP01130 860 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 LBPP18428 481 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 ADRA1AP35348 466 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 MTPNP58546 118 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 IL1RL1Q01638 556 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 SLC36A3Q495N2 470 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 PM20D1Q6GTS8 502 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 BHLHA9Q7RTU4 235 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 HS3ST5Q8IZT8 346 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 IL12RB2Q99665 862 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CHID1Q9BWS9 393 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 ARMC1Q9NVT9 282 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 SARDHQ9UL12 918 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 COQ6Q9Y2Z9 468 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 BNIP3LO60238 219 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 NOBOXO60393 691 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 B4GALT3O60512 393 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 RPL9P32969 192 aaKnown RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 GGT5P36269 586 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 ACVRL1P37023 503 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 GATMP50440 423 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 BMXP51813 675 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 HERVK_113P63132 956 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 IHHQ14623 411 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 NANOGP8Q6NSW7 305 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 RBM12BQ8IXT5 1001 aaKnown RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 TRPV3Q8NET8 790 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 TBC1D15Q8TC07 691 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CALML6Q8TD86 181 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 ERVK-6Q9BXR3 956 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 PCDH12Q9NPG4 1184 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 S1PR4O95977 384 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CAPGP40121 348 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CCT8P50990 548 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 SLC2A7Q6PXP3 512 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 Q6ZNX1 250 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 CENPSQ8N2Z9 138 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 SLC15A4Q8N697 577 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 OR10Q1Q8NGQ4 319 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 GFM2Q969S9 779 aaKnown RBP15.23■□□□□ 0.03
CNOT9-208ENST00000542068 RNF112Q9ULX5 631 aa15.23■□□□□ 0.03
CNOT9-208ENST00000542068 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 H0YJX3 145 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 RHOBTB1O94844 696 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 GOT2P00505 430 aaKnown RBP15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ALDH4A1P30038 563 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 RXRGP48443 463 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 OR4D2P58180 307 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 TAF10Q12962 218 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 TSNQ15631 228 aaKnown RBP15.22■□□□□ 0.03
CNOT9-208ENST00000542068 TAF12Q16514 161 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 RAB41Q5JT25 222 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 PIK3R6Q5UE93 754 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 EGFLAMQ63HQ2 1017 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 PIWIL3Q7Z3Z3 882 aaKnown RBP15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ITIH5Q86UX2 942 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 FBXO30Q8TB52 745 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ROPN1LQ96C74 230 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-208ENST00000542068 MARCH2Q9P0N8 246 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 SH3BP1Q9Y3L3 701 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ACOX3O15254 700 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 RAMP2O60895 175 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 FUCA1P04066 466 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 SLC2A3P11169 496 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 PSMD8P48556 350 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 RENBPP51606 427 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 AIF1P55008 147 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ATP6V0D1P61421 351 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ATP6AP1Q15904 470 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 CYBRD1Q53TN4 286 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ZNF549Q6P9A3 640 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 CROCCP3Q8IVE0 287 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 UBXN10Q96LJ8 280 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 MYRFLQ96LU7 910 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 SLC30A3Q99726 388 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 HOPXQ9BPY8 73 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-208ENST00000542068 CCDC68Q9H2F9 335 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 SMURF2Q9HAU4 748 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 BPIFA1Q9NP55 256 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 ACTR3BQ9P1U1 418 aa15.22■□□□□ 0.03
CNOT9-208ENST00000542068 CCDC154A6NI56 674 aa15.21■□□□□ 0.03
CNOT9-208ENST00000542068 CDC7O00311 574 aa15.21■□□□□ 0.03
CNOT9-208ENST00000542068 SYNCRIPO60506 623 aaKnown RBP15.21■□□□□ 0.03
CNOT9-208ENST00000542068 SHMT2P34897 504 aa15.21■□□□□ 0.03
CNOT9-208ENST00000542068 LEPRP48357 1165 aaKnown RBP15.21■□□□□ 0.03
CNOT9-208ENST00000542068 PRKCZQ05513 592 aa15.21■□□□□ 0.03
CNOT9-208ENST00000542068 SEMA3AQ14563 771 aa15.21■□□□□ 0.03
CNOT9-208ENST00000542068 MAPRE1Q15691 268 aaKnown RBP15.21■□□□□ 0.03
CNOT9-208ENST00000542068 SIRPB2Q5JXA9 342 aa15.21■□□□□ 0.03
CNOT9-208ENST00000542068 TMTC4Q5T4D3 741 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms