RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ZBED5	Q49AG3	693 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NHSL2	Q5HYW2	709 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TIGD7	Q6NT04	549 aa	Predicted RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OLFML1	Q6UWY5	402 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	BEND5	Q7L4P6	421 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SPPL2C	Q8IUH8	684 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SNX29P2	Q8IUI4	249 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LGI2	Q8N0V4	545 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FSTL5	Q8N475	847 aa	Predicted RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CARNMT1	Q8N4J0	409 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TBC1D15	Q8TC07	691 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ASB9	Q96DX5	294 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PAAF1	Q9BRP4	392 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DRC3	Q9H069	523 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	BRD8	Q9H0E9	1235 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TNFRSF12A	Q9NP84	129 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	POLM	Q9NP87	494 aa	Predicted RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CRTAC1	Q9NQ79	661 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		A0A087WXM4	84 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HEATR9	A2RTY3	570 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HIDE1	A8MVS5	230 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NPC1	O15118	1278 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CBFA2T3	O75081	653 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CLDN11	O75508	207 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ABLIM3	O94929	683 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HOXD12	P35452	270 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	BCAP31	P51572	246 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PRKAA1	Q13131	559 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DMC1	Q14565	340 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RAB39A	Q14964	217 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TJAP1	Q5JTD0	557 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DGKK	Q5KSL6	1271 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM46C	Q5VWP2	391 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LIPM	Q5VYY2	423 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CLEC20A	Q6ZU45	233 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KDELC2	Q7Z4H8	507 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PSTK	Q8IV42	348 aa	Known RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ATPAF2	Q8N5M1	289 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC15A4	Q8N697	577 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ARL10	Q8N8L6	244 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OR10T2	Q8NGX3	314 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HMGCLL1	Q8TB92	370 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TANK	Q92844	425 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PPP1R14B	Q96C90	147 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NXNL1	Q96CM4	212 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CXCL16	Q9H2A7	254 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DPEP3	Q9H4B8	488 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TBCCD1	Q9NVR7	557 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	XPR1	Q9UBH6	696 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GIMAP2	Q9UG22	337 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IPO11	Q9UI26	975 aa	Known RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	VPS28	Q9UK41	221 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	VANGL2	Q9ULK5	521 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MTCH2	Q9Y6C9	303 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM247	A6NEH6	219 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GOLGA8CP	A6NN73	597 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	AP3B1	O00203	1094 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GPC4	O75487	556 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ATP6V1B2	P21281	511 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NMBR	P28336	390 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMED10	P49755	219 aa	Known RBP	5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CYP4F8	P98187	520 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CTBP1	Q13363	440 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TDG	Q13569	410 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC12A1	Q13621	1099 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DPYS	Q14117	519 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NR1D2	Q14995	579 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	UBXN2B	Q14CS0	331 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LEXM	Q3ZCV2	418 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	REP15	Q6BDI9	236 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM53	Q6P2H8	277 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CNST	Q6PJW8	725 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KCNMB4	Q86W47	210 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IFNE	Q86WN2	208 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM126B	Q8IUX1	230 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM151A	Q8N4L1	468 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KIAA1958	Q8N8K9	716 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DQX1	Q8TE96	717 aa	Known RBP	5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TFAP2C	Q92754	450 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TSNARE1	Q96NA8	513 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NEURL2	Q9BR09	285 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NPL	Q9BXD5	320 aa	Predicted RBP	5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RHOBTB2	Q9BYZ6	727 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SACM1L	Q9NTJ5	587 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CACNA2D2	Q9NY47	1150 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZCWPW2	A0A1B0GU75	182 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	C1QTNF3-AMACR	E9PGA6	284 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SDHD	O14521	159 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ACSL4	O60488	711 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RAMP2	O60895	175 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	BMP10	O95393	424 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EEF1B2	P24534	225 aa	Known RBP	5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CORO1A	P31146	461 aa	Known RBP	5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CLCN4	P51793	760 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PHEX	P78562	749 aa		5.64	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CREB5	Q02930	508 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms