RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CEACAM20Q6UY09 585 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 ZNF574Q6ZN55 896 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-211ENST00000539843 RFX6Q8HWS3 928 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 TRIM48Q8IWZ4 208 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 PQLC3Q8N755 202 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 NCSTNQ92542 709 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 GPR63Q9BZJ6 419 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 XPO4Q9C0E2 1151 aaKnown RBP15.15■□□□□ 0.02
UBE3B-211ENST00000539843 OSGEPL1Q9H4B0 414 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 DDX56Q9NY93 547 aaKnown RBP15.15■□□□□ 0.02
UBE3B-211ENST00000539843 KCNK6Q9Y257 313 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 ZNF462Q96JM2 2506 aa15.15■□□□□ 0.02
UBE3B-211ENST00000539843 NUAK1O60285 661 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 PRLP01236 227 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 SLC4A1P02730 911 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 VCLP18206 1134 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 CSF2RBP32927 897 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 SLC1A1P43005 524 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 DCDC1P59894 354 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 GTF2H3Q13889 308 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 GALNT3Q14435 633 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 INSCQ1MX18 579 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-211ENST00000539843 ZNF761Q86XN6 746 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-211ENST00000539843 PLXDC1Q8IUK5 500 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 CACNA2D3Q8IZS8 1091 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 TRAM1L1Q8N609 369 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 JPH3Q8WXH2 748 aaPredicted RBP15.14■□□□□ 0.01
UBE3B-211ENST00000539843 RAPGEF5Q92565 580 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 SMIM14Q96QK8 99 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 PACSIN1Q9BY11 444 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 MAGEE1Q9HCI5 957 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 NENFQ9UMX5 172 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 PRKAB1Q9Y478 270 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 ST14Q9Y5Y6 855 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 COL6A6A6NMZ7 2263 aa15.14■□□□□ 0.01
UBE3B-211ENST00000539843 HELZ2Q9BYK8 2649 aaKnown RBP15.13■□□□□ 0.01
UBE3B-211ENST00000539843 ZNF891A8MT65 544 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-211ENST00000539843 A8MU76 341 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 RAD1O60671 282 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 UGT1A3P35503 534 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 CDK18Q07002 472 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 SLC14A2Q15849 920 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 PCSK7Q16549 785 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 LRRC38Q5VT99 294 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 ALS2CLQ60I27 953 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 SLC9A4Q6AI14 798 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 IYDQ6PHW0 289 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 RHOT1Q8IXI2 618 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 NKD1Q969G9 470 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 AGAP3Q96P47 875 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 DNAJC7Q99615 494 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 SLC25A51Q9H1U9 297 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 TRIT1Q9H3H1 467 aaKnown RBP15.13■□□□□ 0.01
UBE3B-211ENST00000539843 TRIM39Q9HCM9 518 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 TBC1D29Q9UFV1 150 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 B3GALT1Q9Y5Z6 326 aa15.13■□□□□ 0.01
UBE3B-211ENST00000539843 OAS3Q9Y6K5 1087 aaKnown RBP15.13■□□□□ 0.01
UBE3B-211ENST00000539843 ARHGEF17Q96PE2 2063 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 A0A0A6YYK5 440 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 LILRA5A6NI73 299 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 PDZK1P1A8MUH7 402 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 FADS2P1A8MWK0 482 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 MTSS1O43312 755 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 SPOPO43791 374 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 VEGFDO43915 354 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ZIC2O95409 532 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 VIPP01282 170 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 MAP4P27816 1152 aaKnown RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 CLCNKAP51800 687 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 KCNC4Q03721 635 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ZBTB17Q13105 803 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 SRSF6Q13247 344 aaKnown RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 TFDP2Q14188 446 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 SKOR2Q2VWA4 1001 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ZDHHC20Q5W0Z9 365 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ANKS6Q68DC2 871 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 CYB5D1Q6P9G0 228 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 BORAQ6PGQ7 559 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ATG14Q6ZNE5 492 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 KDELC2Q7Z4H8 507 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 LRRTM4Q86VH4 590 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 NLGN4XQ8N0W4 816 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 PLD5Q8N7P1 536 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 NLGN4YQ8NFZ3 816 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 LRRN4Q8WUT4 740 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 IMP4Q96G21 291 aaKnown RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 TTC25Q96NG3 672 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ZCCHC2Q9C0B9 1178 aaKnown RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 OR2AG1Q9H205 316 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 ADNPQ9H2P0 1102 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 CLMPQ9H6B4 373 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 GPN2Q9H9Y4 310 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-211ENST00000539843 KLC4Q9NSK0 619 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 TMEM9Q9P0T7 183 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 PDP2Q9P2J9 529 aa15.12■□□□□ 0.01
UBE3B-211ENST00000539843 NFKBIL1Q9UBC1 381 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms