RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, human

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD9-208	ENST00000538834	APOL2	Q9BQE5	337 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	SPATA16	Q9BXB7	569 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	BPIFA1	Q9NP55	256 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	HOMER3	Q9NSC5	361 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	TAAR2	Q9P1P5	351 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	DKK4	Q9UBT3	224 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	RABGEF1	Q9UJ41	708 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	APPL1	Q9UKG1	709 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	RIMKLB	Q9ULI2	386 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	PYCARD	Q9ULZ3	195 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	GPR34	Q9UPC5	381 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	ZNF148	Q9UQR1	794 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	KCTD3	Q9Y597	815 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	ARL5A	Q9Y689	179 aa		13.57	□□□□□ -0.24
CD9-208	ENST00000538834	TRBV5-4	A0A0C4DH59	114 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	FANCG	O15287	622 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	VEGFD	O43915	354 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	CEP104	O60308	925 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	ZNF8	P17098	575 aa	Predicted RBP	13.56	□□□□□ -0.24
CD9-208	ENST00000538834	SPAM1	P38567	509 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	MAGEA6	P43360	314 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	GNPDA1	P46926	289 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	RPIA	P49247	311 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	DAB2	P98082	770 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	CHRNA6	Q15825	494 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	C14orf28	Q4W4Y0	310 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	HS1BP3	Q53T59	392 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	ZNF569	Q5MCW4	686 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	CERCAM	Q5T4B2	595 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	XKR5	Q6UX68	686 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	C4orf22	Q6V702	233 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	TAF8	Q7Z7C8	310 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	PRUNE1	Q86TP1	453 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	DDHD1	Q8NEL9	900 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	OR4K2	Q8NGD2	314 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	OR6C4	Q8NGE1	309 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	COG1	Q8WTW3	980 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	SCG3	Q8WXD2	468 aa	Known RBP	13.56	□□□□□ -0.24
CD9-208	ENST00000538834	GLMN	Q92990	594 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	NAT6	Q93015	286 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	OSBPL9	Q96SU4	736 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	GSDMC	Q9BYG8	508 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	CASS4	Q9NQ75	786 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	PAK5	Q9P286	719 aa		13.56	□□□□□ -0.24
CD9-208	ENST00000538834	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	IGLV3-16	A0A075B6K0	115 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GLYATL1P3	A0A0U1RQE8	302 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GOLGA6C	A6NDK9	693 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GOLGA6B	A6NDN3	693 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	C2orf81	A6NN90	581 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	CASC3	O15234	703 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	BUD23	O43709	281 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	SGTA	O43765	313 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	NUDT21	O43809	227 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	SLC25A14	O95258	325 aa	Predicted RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	EML2	O95834	649 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	PTMA	P06454	111 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	ZSCAN5DP	P0CG00	497 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GOLGA6D	P0CG33	693 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GLB1	P16278	677 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GRIA1	P42261	906 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	KCNJ1	P48048	391 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	PDE1B	Q01064	536 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	ACVR1	Q04771	509 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	ILF3	Q12906	894 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	SQSTM1	Q13501	440 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	SNX1	Q13596	522 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	ZNF648	Q5T619	568 aa	Predicted RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	HES3	Q5TGS1	186 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	PAPD7	Q5XG87	772 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	ALS2CL	Q60I27	953 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	TTC27	Q6P3X3	843 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	LINC00523	Q86TU6	105 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	FAM46D	Q8NEK8	389 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	OR13C4	Q8NGS5	318 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	MS4A14	Q96JA4	679 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	CNTNAP3B	Q96NU0	1288 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	RANBP9	Q96S59	729 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	CNTNAP3	Q9BZ76	1288 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	EIF2B3	Q9NR50	452 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	EVA1B	Q9NVM1	165 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	NLE1	Q9NVX2	485 aa	Predicted RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	TRMT1	Q9NXH9	659 aa	Known RBP	13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GOLGA6A	Q9NYA3	693 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	GULP1	Q9UBP9	304 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	SLC23A2	Q9UGH3	650 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	SNX12	Q9UMY4	172 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834	ZFHX4	Q86UP3	3567 aa		13.55	□□□□□ -0.24
CD9-208	ENST00000538834		A0A1W2PQM1	296 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	C1QTNF9B	B2RNN3	333 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	STX7	O15400	261 aa	Known RBP	13.54	□□□□□ -0.24
CD9-208	ENST00000538834	GPR39	O43194	453 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	GRID2	O43424	1007 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	UGT1A9	O60656	530 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	CRTAM	O95727	393 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	PROS1	P07225	676 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	C1QTNF9	P0C862	333 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	UGT1A6	P19224	532 aa		13.54	□□□□□ -0.24
CD9-208	ENST00000538834	UGT1A1	P22309	533 aa		13.54	□□□□□ -0.24

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