RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 BDH2Q9BUT1 245 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SPATA5L1Q9BVQ7 753 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PAPOLBQ9NRJ5 636 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 DZANK1Q9NVP4 752 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 COQ6Q9Y2Z9 468 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 A0A1W2PPM1 405 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 H3BNH8 94 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 RFXANKO14593 260 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 DEAF1O75398 565 aaPredicted RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 MTX2O75431 263 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TRBC1P01850 177 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TPSB2P20231 275 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ACVRL1P37023 503 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 RAD23AP54725 363 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TAS2R41P59536 307 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 CYP4F3Q08477 520 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ZNF460Q14592 562 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TPSAB1Q15661 275 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 PLEKHG4Q58EX7 1191 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ANXA8L1Q5VT79 327 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FAM171BQ6P995 826 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 AMZ2Q86W34 360 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 DCBLD1Q8N8Z6 715 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 BHLHE22Q8NFJ8 381 aaPredicted RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 GDPD5Q8WTR4 605 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SLC9A6Q92581 669 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ITCHQ96J02 903 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 MYCBPQ99417 103 aaPredicted RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 RPRD1BQ9NQG5 326 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 CORO2BQ9UQ03 480 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 CHD4Q14839 1912 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 PLCH1Q4KWH8 1693 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 NWD2Q9ULI1 1742 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FAM25AB3EWG3 89 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FAM25CB3EWG5 89 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FAM25GB3EWG6 89 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TULP2O00295 520 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ARHGEF9O43307 516 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SIN3BO75182 1162 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 OR6B1O95007 311 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TIMP1P01033 207 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 PROCP04070 461 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SLC35G6P0C7Q6 338 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 NRG1Q02297 640 aaPredicted RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 C2orf80Q0P641 193 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SLC13A2Q13183 592 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SUZ12Q15022 739 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 ATP13A5Q4VNC0 1218 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FAM182AQ5T1J6 154 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 IRF2BP1Q8IU81 584 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 CAMK1DQ8IU85 385 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 WDR36Q8NI36 951 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 ACDQ96AP0 544 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 EBPLQ9BY08 206 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 NOL11Q9H8H0 719 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 ABI3Q9P2A4 366 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 PCDHB11Q9Y5F2 797 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 CCDC88AQ3V6T2 1871 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 NAV1Q8NEY1 1877 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 CLDN4O14493 209 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 CBX6O95503 412 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 LDLRP01130 860 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SNRPB2P08579 225 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 COL6A1P12109 1028 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SOX6P35712 828 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 GSTM5P46439 218 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 RAPSNQ13702 412 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 GTF2H2Q13888 395 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ITPRIPL2Q3MIP1 535 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 TSTD2Q5T7W7 516 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FBXL22Q6P050 247 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 GTF2H2CQ6P1K8 395 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 MED27Q6P2C8 311 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 C17orf99Q6UX52 265 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 GPR180Q86V85 440 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SLC43A3Q8NBI5 491 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 VANGL1Q8TAA9 524 aaPredicted RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 APOLD1Q96LR9 279 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 PCYT2Q99447 389 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 S100A13Q99584 98 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 BTBD10Q9BSF8 475 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 RHOJQ9H4E5 214 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 FAM124BQ9H5Z6 455 aaPredicted RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 PNO1Q9NRX1 252 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 SEMA3GQ9NS98 782 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 DDX28Q9NUL7 540 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 PACSIN3Q9UKS6 424 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 HS3ST4Q9Y661 456 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 C5P01031 1676 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 AP3D1O14617 1153 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 GPR32O75388 356 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 GJA5P36382 358 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 SPIBQ01892 262 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 EIF3MQ7L2H7 374 aaKnown RBP5.32□□□□□ -1.56
LRP6-203ENST00000538239 UNC5BQ8IZJ1 945 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 ZNF248Q8NDW4 579 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 RDH11Q8TC12 318 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 MFSD3Q96ES6 412 aa5.32□□□□□ -1.56
LRP6-203ENST00000538239 LEF1Q9UJU2 399 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms