RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 CXCR5P32302 372 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 GRIA1P42261 906 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CCL7P80098 99 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 XIAPP98170 497 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 B4GALNT1Q00973 533 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 E2F1Q01094 437 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CFHR1Q03591 330 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CYP4F3Q08477 520 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 ST3GAL2Q16842 350 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 PARP6Q2NL67 630 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CERCAMQ5T4B2 595 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 SLC30A9Q6PML9 568 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 C11orf96Q7Z7L8 435 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 B3GNT8Q7Z7M8 397 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 GKN2Q86XP6 184 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 GALNT15Q8N3T1 639 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 SDR16C5Q8N3Y7 309 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 ARL14Q8N4G2 192 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 TAB3Q8N5C8 712 aaPredicted RBP8.32□□□□□ -1.08
SPARC-208ENST00000538026 TRAM1L1Q8N609 369 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 ATL2Q8NHH9 583 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CCHCR1Q8TD31 782 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 BLOC1S5Q8TDH9 187 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 GLYATL1Q969I3 302 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CCDC74AQ96AQ1 378 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 PRR11Q96HE9 360 aaPredicted RBP8.32□□□□□ -1.08
SPARC-208ENST00000538026 MS4A14Q96JA4 679 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CCDC3Q9BQI4 270 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CARD9Q9H257 536 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 HAUS2Q9NVX0 235 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 PIH1D1Q9NWS0 290 aaKnown RBP8.32□□□□□ -1.08
SPARC-208ENST00000538026 TBC1D29Q9UFV1 150 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 CLCA2Q9UQC9 943 aa8.32□□□□□ -1.08
SPARC-208ENST00000538026 SEC16AO15027 2179 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TRBV23OR9-2A0A075B6M9 112 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 PRAMEF33A0A0G2JMD5 474 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 SRRM3A6NNA2 597 aaPredicted RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 USP27XA6NNY8 438 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 GOLGA6L6A8MZA4 724 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 B4DGG1 531 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 CCL22O00626 93 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 CHUKO15111 745 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 FANCGO15287 622 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TLX3O43711 291 aaPredicted RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 ANXA9O76027 345 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 PRSS56P0CW18 603 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 CDK4P11802 303 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TPH1P17752 444 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 PSMA3P25788 255 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 KCNJ1P48048 391 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ZNF140P52738 457 aaPredicted RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 CTSCP53634 463 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 GEMP55040 296 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 SNX1Q13596 522 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 PEX6Q13608 980 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 NR1D2Q14995 579 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 RTP5Q14D33 572 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ISXQ2M1V0 245 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 C14orf28Q4W4Y0 310 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ZNF574Q6ZN55 896 aaPredicted RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 ZNF438Q7Z4V0 828 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TXLNBQ8N3L3 684 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 PDCD7Q8N8D1 485 aaKnown RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 PRELID2Q8N945 189 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 OR4K2Q8NGD2 314 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 OR13C4Q8NGS5 318 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 MAPK15Q8TD08 544 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 DTX3LQ8TDB6 740 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ZDHHC1Q8WTX9 485 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 PLEKHG4BQ96PX9 1271 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 VPS35Q96QK1 796 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 OR2M4Q96R27 311 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TBL1YQ9BQ87 522 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ZSCAN5AQ9BUG6 496 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 SPATA16Q9BXB7 569 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 OR2AG1Q9H205 316 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 DPEP2Q9H4A9 486 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TRABDQ9H4I3 376 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ETNK1Q9HBU6 452 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 TRIM39Q9HCM9 518 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 SMARCAL1Q9NZC9 954 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 SCHIP1Q9P0W5 487 aaPredicted RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 VPS18Q9P253 973 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 APPL1Q9UKG1 709 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ATXN7L1Q9ULK2 861 aaPredicted RBP8.31□□□□□ -1.08
SPARC-208ENST00000538026 GPSM3Q9Y4H4 160 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ENTPD2Q9Y5L3 495 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 ADAMTS20P59510 1910 aa8.31□□□□□ -1.08
SPARC-208ENST00000538026 AGAP14A8MT82 685 aa8.3□□□□□ -1.08
SPARC-208ENST00000538026 GRID2O43424 1007 aa8.3□□□□□ -1.08
SPARC-208ENST00000538026 CSO75390 466 aaKnown RBP8.3□□□□□ -1.08
SPARC-208ENST00000538026 SLC25A14O95258 325 aaPredicted RBP8.3□□□□□ -1.08
SPARC-208ENST00000538026 ASMTLO95671 621 aa8.3□□□□□ -1.08
SPARC-208ENST00000538026 AP2A1O95782 977 aa8.3□□□□□ -1.08
SPARC-208ENST00000538026 PYGLP06737 847 aa8.3□□□□□ -1.08
SPARC-208ENST00000538026 HOXB3P14651 431 aaPredicted RBP8.3□□□□□ -1.08
SPARC-208ENST00000538026 BRAFP15056 766 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms