RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NFATC2Q13469 925 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SNAP47Q5SQN1 464 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 LYSMD3Q7Z3D4 306 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SLC9B2Q86UD5 537 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CACNA2D3Q8IZS8 1091 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 COL26A1Q96A83 441 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 RNF157Q96PX1 679 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 TEFMQ96QE5 360 aaKnown RBP19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SLC12A9Q9BXP2 914 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 IFNKQ9P0W0 207 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 A8MU76 341 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SNX2O60749 519 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 F3P13726 295 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 LIFP15018 202 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HNRNPH3P31942 346 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 MAN1A1P33908 653 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 IFI35P80217 286 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SLC18A3Q16572 532 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ANKS6Q68DC2 871 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ARHGAP22Q7Z5H3 698 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 BMPERQ8N8U9 685 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 NCSTNQ92542 709 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 RAPGEF5Q92565 580 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PACSIN1Q9BY11 444 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CARD9Q9H257 536 aa19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.47■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KIR2DS5A0A0G2JLQ3 304 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 A0A0G2JNG1 304 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 A6NCN8 305 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 OR5K4A6NMS3 321 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KIR2DS3K7RE56 304 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 GRID2O43424 1007 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 NUAK1O60285 661 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 RAD1O60671 282 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PPFIA2O75334 1257 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 EPHA4P54764 986 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ZBTB17Q13105 803 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 GALNT3Q14435 633 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KIR2DS5Q14953 304 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PHYKPLQ8IUZ5 450 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PLD5Q8N7P1 536 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CNTD1Q8N815 330 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 AVL9Q8NBF6 648 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ZFYVE1Q9HBF4 777 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 GEMIN8Q9NWZ8 242 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ATXN10Q9UBB4 475 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HEY1Q9Y5J3 304 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 DOPEY2Q9Y3R5 2298 aa19.46■□□□□ 0.71
TNFRSF1B-204ENST00000536782 LRRD1A4D1F6 860 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 MAPK9P45984 424 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 NFKB2Q00653 900 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 MC2RQ01718 297 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 AP1B1Q10567 949 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 MESDQ14696 234 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CLCA4Q14CN2 919 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 SKOR2Q2VWA4 1001 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ZNF569Q5MCW4 686 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 BORAQ6PGQ7 559 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ATG14Q6ZNE5 492 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 RTP4Q96DX8 246 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ZPBPQ9BS86 351 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 SPATA16Q9BXB7 569 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 EPB41L1Q9H4G0 881 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 RAD18Q9NS91 495 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 PILRAQ9UKJ1 303 aa19.45■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ZNF487B1APH4 448 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CAPN5O15484 640 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 SLC25A14O95258 325 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 TPM3P06753 285 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 TMEM253P0C7T8 217 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ZNF8P17098 575 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CSRP3P50461 194 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CLCNKAP51800 687 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CEACAM20Q6UY09 585 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 KDELC2Q7Z4H8 507 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 NT5DC3Q86UY8 548 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 NLGN4XQ8N0W4 816 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 NLGN4YQ8NFZ3 816 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 EID2BQ96D98 161 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 TRIB3Q96RU7 358 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CTRCQ99895 268 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ZSCAN5AQ9BUG6 496 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 MAK16Q9BXY0 300 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 TRIM4Q9C037 500 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 SLC25A18Q9H1K4 315 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 OR2AG1Q9H205 316 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ADNPQ9H2P0 1102 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 DEF6Q9H4E7 631 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 TRIM39Q9HCM9 518 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ARFGAP3Q9NP61 516 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 PRDM8Q9NQV8 689 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 FBXO8Q9NRD0 319 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 KLC4Q9NSK0 619 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 CPNE7Q9UBL6 633 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 IL17BQ9UHF5 180 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 SHOC2Q9UQ13 582 aa19.44■□□□□ 0.7
TNFRSF1B-204ENST00000536782 ZNF891A8MT65 544 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1B-204ENST00000536782 GPR89AB7ZAQ6 455 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms