RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 DNAJC6O75061 913 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 RBL1P28749 1068 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 WNT3AP56704 352 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CCL7P80098 99 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SIX1Q15475 284 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CCNG2Q16589 344 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MARK2Q7KZI7 788 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 NAGSQ8N159 534 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SLC35B2Q8TB61 432 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZDHHC1Q8WTX9 485 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 C1orf54Q8WWF1 131 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ATG4AQ8WYN0 398 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ATXN7L3BQ96GX2 97 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CAPZA3Q96KX2 299 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CDH19Q9H159 772 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SYNDIG1Q9H7V2 258 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 RNF14Q9UBS8 474 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 APPL1Q9UKG1 709 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 RNF215Q9Y6U7 377 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 AHCTF1Q8WYP5 2266 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GOLGA6L10A0A0M3HER8 536 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 NUDT21O43809 227 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ASMTLO95671 621 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SLC4A1P02730 911 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PNLIPP16233 465 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PAFAH1B1P43034 410 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 LSSP48449 732 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MAZP56270 477 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 DCDC1P59894 354 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GABREP78334 506 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PATE1Q8WXA2 126 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GRAMD1AQ96CP6 724 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GPR63Q9BZJ6 419 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 LRRN3Q9H3W5 708 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 VPS18Q9P253 973 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 LRIT1Q9P2V4 623 aa17.71■□□□□ 0.43
TNFRSF1A-209ENST00000536717 A0A087WV48 116 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 D6RAR5 112 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 LIASO43766 372 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 DXOO77932 396 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 STK10O94804 968 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ECEL1O95672 775 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 EPOP01588 193 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 RPLP0P05388 317 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ACTR1BP42025 376 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CHRNA4P43681 627 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ACTR1AP61163 376 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TBC1D25Q3MII6 688 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 C3orf38Q5JPI3 329 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ALS2CLQ60I27 953 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CCDC70Q6NSX1 233 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 C19orf48Q6RUI8 117 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GALNT13Q8IUC8 556 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CREG2Q8IUH2 290 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CCNJLQ8IV13 435 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 KIF18AQ8NI77 898 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SNIP1Q8TAD8 396 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GORASP1Q9BQQ3 440 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 POLR1BQ9H9Y6 1135 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 RALYQ9UKM9 306 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TRHDEQ9UKU6 1024 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SATB2Q9UPW6 733 aa17.7■□□□□ 0.42
TNFRSF1A-209ENST00000536717 KCNN4O15554 427 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 BPIP17213 487 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 EIF2S3P41091 472 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 MPP3Q13368 585 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SNX1Q13596 522 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SIRPB2Q5JXA9 342 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 DRICH1Q6PGQ1 229 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SPRED1Q7Z699 444 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 B3GNT8Q7Z7M8 397 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ARL14Q8N4G2 192 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TRAM1L1Q8N609 369 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 Q8N9G6 341 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 IPMKQ8NFU5 416 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 FGF11Q92914 225 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 DCBLD2Q96PD2 775 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GFM1Q96RP9 751 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SRPK1Q96SB4 655 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZSCAN5AQ9BUG6 496 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SPATA16Q9BXB7 569 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 AP1M1Q9BXS5 423 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ARFGAP3Q9NP61 516 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SMARCAL1Q9NZC9 954 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 RSPH14Q9UHP6 348 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNF148Q9UQR1 794 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PRKAB1Q9Y478 270 aa17.69■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PMS2P1A4D2B8 440 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ESPNB1AK53 854 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 URI1O94763 535 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ACTN2P35609 894 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 HMGCLP35914 325 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 B4GALNT1Q00973 533 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 OASLQ15646 514 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SLC1A5Q15758 541 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNF438Q7Z4V0 828 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SLC25A41Q8N5S1 370 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PRELID2Q8N945 189 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms