RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PPARDQ03181 441 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 LAMB3Q13751 1172 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 UAP1L1Q3KQV9 507 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 NLRP9Q7RTR0 991 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 ADGRG6Q86SQ4 1221 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 HID1Q8IV36 788 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 OXR1Q8N573 874 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 PNPLA1Q8N8W4 532 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SAP25Q8TEE9 199 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 HDAC10Q969S8 669 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SCARF2Q96GP6 870 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 FCRL3Q96P31 734 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 ASB8Q9H765 288 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 MRM3Q9HC36 420 aaKnown RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 CYP4F12Q9HCS2 524 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SMOXQ9NWM0 555 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 WHRNQ9P202 907 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 ATXN10Q9UBB4 475 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 DMGDHQ9UI17 866 aaKnown RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 MOSPD1Q9UJG1 213 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 GVINP1Q7Z2Y8 2422 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 FAM186AA6NE01 2351 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 KNL1Q8NG31 2342 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ESYT3A0FGR9 886 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 PRSS38A1L453 326 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 DNAJC6O75061 913 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 RASGRP1O95267 797 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ASMTLO95671 621 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 GOT2P00505 430 aaKnown RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 IVLP07476 585 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 CELA2BP08218 269 aaPredicted RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 ZNF883P0CG24 379 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 GIMD1P0DJR0 217 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ZNF8P17098 575 aaPredicted RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 DGKAP23743 735 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ARNTP27540 789 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 FOXN2P32314 431 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ARRB1P49407 418 aaPredicted RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 LIMK1P53667 647 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 NFATC2Q13469 925 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 C1orf61Q13536 156 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ITGA9Q13797 1035 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 TCEA2Q15560 299 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 DNTTIP2Q5QJE6 756 aaKnown RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 GPRC6AQ5T6X5 926 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 PSAPL1Q6NUJ1 521 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 DBX2Q6ZNG2 339 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 MARK2Q7KZI7 788 aaKnown RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 SNX20Q7Z614 316 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 SLC25A45Q8N413 288 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 BBOF1Q8ND07 529 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 PEX13Q92968 403 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 WDR83Q9BRX9 315 aaKnown RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 LRRC61Q9BV99 259 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 CLPBQ9H078 707 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 RAB17Q9H0T7 212 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 APOBEC3BQ9UH17 382 aaKnown RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 SUFUQ9UMX1 484 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
TMEM258-202ENST00000535042 PRKAB1Q9Y478 270 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 PLEKHM1Q9Y4G2 1056 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 SLC30A1Q9Y6M5 507 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 DGKBQ9Y6T7 804 aa13□□□□□ -0.33
TMEM258-202ENST00000535042 TRBV5-4A0A0C4DH59 114 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 FAM237BA0A1B0GVD1 139 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 SMAPO00193 183 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 PCDHGA12O60330 932 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 TNFP01375 233 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 ITGALP20701 1170 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 GNPDA1P46926 289 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 DRG2P55039 364 aaKnown RBP12.99□□□□□ -0.33
TMEM258-202ENST00000535042 HNRNPKP61978 463 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM258-202ENST00000535042 SEMA3AQ14563 771 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 SMAD1Q15797 465 aaKnown RBP12.99□□□□□ -0.33
TMEM258-202ENST00000535042 BBS9Q3SYG4 887 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 ANKRD20A4Q4UJ75 823 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 HP1BP3Q5SSJ5 553 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-202ENST00000535042 CASC4Q6P4E1 433 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 TMEM135Q86UB9 458 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 PHYKPLQ8IUZ5 450 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 ZNF548Q8NEK5 533 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-202ENST00000535042 DDHD1Q8NEL9 900 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 CCL4L1Q8NHW4 92 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 NETO1Q8TDF5 533 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 LMX1AQ8TE12 382 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 NAT14Q8WUY8 206 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 SEC14L1Q92503 715 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 ART4Q93070 314 aa12.99□□□□□ -0.33
TMEM258-202ENST00000535042 TMEM168Q9H0V1 697 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms