RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	USP28	Q96RU2	1077 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	ULBP1	Q9BZM6	244 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	IMPG2	Q9BZV3	1241 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	DNAI2	Q9GZS0	605 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	KCTD10	Q9H3F6	313 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	MS4A5	Q9H3V2	200 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	STARD5	Q9NSY2	213 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	KLHL11	Q9NVR0	708 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	NLGN3	Q9NZ94	848 aa		6.2	□□□□□ -1.42
PICALM-223	ENST00000534412	TP53BP1	Q12888	1972 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3D	A0A087WVF3	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3I	A0A087WXS9	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3E	A0A087X179	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3K	A0A087X1G2	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	VPS37C	A5D8V6	355 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3F	A6NER0	549 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	YJEFN3	A6XGL0	299 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3L	B9A6J9	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412		E7ENQ6	273 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	PRAMEF26	H0Y7S4	382 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TULP2	O00295	520 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	PDXK	O00764	312 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	XPO1	O14980	1071 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBL1X	O60907	577 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	KIF20A	O95235	890 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	NR3C1	P04150	777 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	CLEC2L	P0C7M8	214 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3H	P0C7X1	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	MYCLP1	P12525	358 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	ITGB6	P18564	788 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	PDC	P20941	246 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	SLC11A2	P49281	568 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	RAD23B	P54727	409 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	GYS2	P54840	703 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	SLC8A3	P57103	927 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	ECT2L	Q008S8	904 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	MEF2A	Q02078	507 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	APBA1	Q02410	837 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	CEBPZ	Q03701	1054 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	ARL13B	Q3SXY8	428 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	SETMAR	Q53H47	684 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	FSCB	Q5H9T9	825 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	PITRM1	Q5JRX3	1037 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	COLEC12	Q5KU26	742 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	BSPRY	Q5W0U4	402 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	NUGGC	Q68CJ6	796 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3G	Q6DHY5	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	NADSYN1	Q6IA69	706 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3C	Q6IPX1	549 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	RFWD3	Q6PCD5	774 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	PRPF39	Q86UA1	669 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	TBC1D3	Q8IZP1	549 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	STK40	Q8N2I9	435 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	EXD3	Q8N9H8	876 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	SLC4A11	Q8NBS3	891 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	LINC00301	Q8NCQ3	95 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	KIAA0895	Q8NCT3	520 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	RNF139	Q8WU17	664 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	NDRG1	Q92597	394 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	DHX58	Q96C10	678 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	APOLD1	Q96LR9	279 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	SPAG5	Q96R06	1193 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	DCLRE1C	Q96SD1	692 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	AGAP2	Q99490	1192 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	NDC1	Q9BTX1	674 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	CNGB3	Q9NQW8	809 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	ABCC13	Q9NSE7	274 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	SATB2	Q9UPW6	733 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	ERVW-1	Q9UQF0	538 aa		6.19	□□□□□ -1.42
PICALM-223	ENST00000534412	COL27A1	Q8IZC6	1860 aa	Predicted RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	GOLGA6L7	A0A1B0GV03	622 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	TYW5	A2RUC4	315 aa	Known RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	SCAMP1	O15126	338 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	ALOX15B	O15296	676 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	FFAR2	O15552	330 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	ACSL4	O60488	711 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	PPP6R2	O75170	966 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	RTN2	O75298	545 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	TCEA3	O75764	348 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	PIAS2	O75928	621 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	LUC7L3	O95232	432 aa	Known RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	IL1B	P01584	269 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	ITGA2B	P08514	1039 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	THEGL	P0DJG4	465 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	ALPPL2	P10696	532 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	KRT10	P13645	584 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	KRT4	P19013	534 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	TGM2	P21980	687 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	CASP1	P29466	404 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	RBMS1	P29558	406 aa	Known RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	GCLM	P48507	274 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	DUSP3	P51452	185 aa	Predicted RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	VAMP7	P51809	220 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	PDX1	P52945	283 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	METAP1	P53582	386 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	DAOA	P59103	153 aa		6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	NANOS3	P60323	173 aa	Known RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	RPS24	P62847	133 aa	Known RBP	6.18	□□□□□ -1.42
PICALM-223	ENST00000534412	PPP3CA	Q08209	521 aa		6.18	□□□□□ -1.42

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