RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 DBX2Q6ZNG2 339 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 MARK2Q7KZI7 788 aaKnown RBP23.96■■□□□ 1.43
SIPA1-210ENST00000534406 FSTL5Q8N475 847 aaPredicted RBP23.96■■□□□ 1.43
SIPA1-210ENST00000534406 GDAP1Q8TB36 358 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 ZNF398Q8TD17 642 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 SETD7Q8WTS6 366 aaKnown RBP23.96■■□□□ 1.43
SIPA1-210ENST00000534406 TRIM31Q9BZY9 425 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 ZCCHC2Q9C0B9 1178 aaKnown RBP23.96■■□□□ 1.43
SIPA1-210ENST00000534406 ASB8Q9H765 288 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 CRLS1Q9UJA2 301 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 TMPRSS11EQ9UL52 423 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 SLC30A1Q9Y6M5 507 aa23.96■■□□□ 1.43
SIPA1-210ENST00000534406 CNOT1A5YKK6 2376 aaKnown RBP23.95■■□□□ 1.43
SIPA1-210ENST00000534406 ARID1BQ8NFD5 2236 aaPredicted RBP23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SMAPO00193 183 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 NDC80O14777 642 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SCAMP1O15126 338 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SH3BP5O60239 455 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A9O60656 530 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SEC31AO94979 1220 aaKnown RBP23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A6P19224 532 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A1P22309 533 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A4P22310 534 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A3P35503 534 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A5P35504 534 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 GNPDA1P46926 289 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 ELOCQ15369 112 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 LDLRAP1Q5SW96 308 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SNX20Q7Z614 316 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 GALNT13Q8IUC8 556 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 DDHD1Q8NEL9 900 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 OR13J1Q8NGT2 312 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 ULK4Q96C45 1275 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SCARF2Q96GP6 870 aaPredicted RBP23.95■■□□□ 1.42
SIPA1-210ENST00000534406 CDKN2AIPNLQ96HQ2 116 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 OR2AG1Q9H205 316 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A7Q9HAW7 530 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A10Q9HAW8 530 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 UGT1A8Q9HAW9 530 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 MRM3Q9HC36 420 aaKnown RBP23.95■■□□□ 1.42
SIPA1-210ENST00000534406 TRIM39Q9HCM9 518 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SAMD15Q9P1V8 674 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SLC2A6Q9UGQ3 507 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 CSNK1G3Q9Y6M4 447 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 SPTBN4Q9H254 2564 aa23.95■■□□□ 1.42
SIPA1-210ENST00000534406 NEMP2A6NFY4 417 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 GPR89AB7ZAQ6 455 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 FFAR2O15552 330 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 AVILO75366 819 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 GPR89BP0CG08 455 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 MAGEA3P43357 314 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 RPL21P46778 160 aaKnown RBP23.94■■□□□ 1.42
SIPA1-210ENST00000534406 ARSDP51689 593 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 ACVR1Q04771 509 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 C1orf61Q13536 156 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 GPR33Q49SQ1 333 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 GPRC6AQ5T6X5 926 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 CASC4Q6P4E1 433 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 AFTPHQ6ULP2 937 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 PIP4P1Q86T03 277 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 ZNF778Q96MU6 729 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 OR2M4Q96R27 311 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 ERP44Q9BS26 406 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 KIFC1Q9BW19 673 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 RMI1Q9H9A7 625 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 CHRAC1Q9NRG0 131 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 DLL3Q9NYJ7 618 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 ATXN10Q9UBB4 475 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 SOX13Q9UN79 622 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 BTBD3Q9Y2F9 522 aa23.94■■□□□ 1.42
SIPA1-210ENST00000534406 CTAGE15A4D2H0 777 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 TM4SF5O14894 197 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 VEGFDO43915 354 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 MTX2O75431 263 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 CTAGE8P0CG41 777 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 ALPPL2P10696 532 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 ITGA8P53708 1063 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 PRAMEP78395 509 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 CACNG1Q06432 222 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 TCEA2Q15560 299 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 KHDC1Q4VXA5 237 aaKnown RBP23.93■■□□□ 1.42
SIPA1-210ENST00000534406 ZRANB3Q5FWF4 1079 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 ZNF648Q5T619 568 aaPredicted RBP23.93■■□□□ 1.42
SIPA1-210ENST00000534406 C8orf74Q6P047 294 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 ADGRG6Q86SQ4 1221 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 CTAGE6Q86UF2 777 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 CTAGE4Q8IX94 777 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 SLC25A45Q8N413 288 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 BBOF1Q8ND07 529 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 RAB17Q9H0T7 212 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 TMEM168Q9H0V1 697 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 SLC32A1Q9H598 525 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 TRNAU1APQ9NX07 287 aaKnown RBP23.93■■□□□ 1.42
SIPA1-210ENST00000534406 NLGN3Q9NZ94 848 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 SNX24Q9Y343 169 aa23.93■■□□□ 1.42
SIPA1-210ENST00000534406 UTP11Q9Y3A2 253 aaKnown RBP23.93■■□□□ 1.42
SIPA1-210ENST00000534406 COL5A1P20908 1838 aaPredicted RBP23.93■■□□□ 1.42
SIPA1-210ENST00000534406 CCDC162PA2VCL2 907 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 SDR42E2A6NKP2 422 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 AGAP14A8MT82 685 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms