RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 SLC5A3P53794 718 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 MRPL58Q14197 206 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 PARP15Q460N3 678 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 PRR23BQ6ZRT6 265 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 LINC00299Q6ZSB3 139 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 LPCAT2Q7L5N7 544 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SPATA19Q7Z5L4 167 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ATPAF2Q8N5M1 289 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TRPV1Q8NER1 839 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TNIP2Q8NFZ5 429 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 OR52K2Q8NGK3 314 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SREK1Q8WXA9 508 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 SGCDQ92629 289 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 RPL10LQ96L21 214 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 MGME1Q9BQP7 344 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 NUSAP1Q9BXS6 441 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 TRIM8Q9BZR9 551 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 UPF3AQ9H1J1 476 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 GORASP2Q9H8Y8 452 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 PLGRKTQ9HBL7 147 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 AKIP1Q9NQ31 210 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ABCC13Q9NSE7 274 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 NLE1Q9NVX2 485 aaPredicted RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 ASIC5Q9NY37 505 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GMIPQ9P107 970 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GIT1Q9Y2X7 761 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 PCDHGA4Q9Y5G9 962 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SNX13Q9Y5W8 968 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SYNJ2BP-COX16A0A087WUM0 186 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 A0A087WXM4 84 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 MYADML2A6NDP7 307 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 H7C0S8 307 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 M0QX08 132 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 UBXN8O00124 270 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GFRA2O00451 464 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 LSM1O15116 133 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 CFLARO15519 480 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TBC1D4O60343 1298 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CLASP2O75122 1294 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 SNAP29O95721 258 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 RHOQP17081 205 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CES1P23141 567 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 DSC2Q02487 901 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 DSC1Q08554 894 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 NFATC3Q12968 1075 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SERINC3Q13530 473 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 RABL3Q5HYI8 236 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 FAM26DQ5JW98 314 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TMTC4Q5T4D3 741 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ZNF773Q6PK81 442 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TFAP2DQ7Z6R9 452 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ZNF554Q86TJ5 538 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 RBM23Q86U06 439 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 LDB1Q86U70 411 aaPredicted RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 GALNT13Q8IUC8 556 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CRIPAKQ8N1N5 446 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 C10orf111Q8N326 155 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 KLHDC9Q8NEP7 349 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 PNPT1Q8TCS8 783 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 RSPH1Q8WYR4 309 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SNX19Q92543 992 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GFM2Q969S9 779 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 MUL1Q969V5 352 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 PBXIP1Q96AQ6 731 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SUSD3Q96L08 255 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ZNF583Q96ND8 569 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 FEM1AQ9BSK4 669 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GABARAPL1Q9H0R8 117 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ALG9Q9H6U8 611 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CYP4F12Q9HCS2 524 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 RBM22Q9NW64 420 aaKnown RBP eCLIP4.39□□□□□ -1.71
CTSC-208ENST00000533897 SMPD4Q9NXE4 827 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 COX16Q9P0S2 106 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 COL4A2P08572 1712 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 MUC22E2RYF6 1773 aaPredicted RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 PTPRSQ13332 1948 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TMEM229AB2RXF0 380 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 NPIPB8E9PQR5 432 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TMEM189-UBE2V1I3L0A0 370 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 OR7A17O14581 309 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 EI24O14681 340 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 AZIN1O14977 448 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 PRAMEF11O60813 436 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 ADAM23O75077 832 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 JRKO75564 520 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 SUPT7LO94864 414 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 OAZ2O95190 189 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CLIC3O95833 236 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GOT2P00505 430 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 PRSS56P0CW18 603 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 GGT1P19440 569 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CA5AP35218 305 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 MAGEA2P43356 314 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 MAGEA8P43361 318 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 KPNA2P52292 529 aaKnown RBP4.39□□□□□ -1.71
CTSC-208ENST00000533897 OR4D2P58180 307 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 IFITM3Q01628 133 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 TUBA3CQ13748 450 aa4.39□□□□□ -1.71
CTSC-208ENST00000533897 CAPRIN1Q14444 709 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms