RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ZNF598Q86UK7 904 aaKnown RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 SIDT2Q8NBJ9 832 aaKnown RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 B4GALNT2Q8NHY0 566 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 STYXQ8WUJ0 223 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 PAWRQ96IZ0 340 aaKnown RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 HAPLN3Q96S86 360 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 CCDC28BQ9BUN5 200 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 WRAP53Q9BUR4 548 aaKnown RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 ARMC7Q9H6L4 198 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 PNPLA8Q9NP80 782 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 ABCB8Q9NUT2 735 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 KIAA1522Q9P206 1035 aaPredicted RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 CCDC189A1A4V9 331 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 NIPSNAP2O75323 286 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 CCDC157Q569K6 752 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 MARCH8Q5T0T0 291 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 CDK15Q96Q40 435 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 TCF12Q99081 682 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 TLE6Q9H808 572 aa12.35□□□□□ -0.43
RAD50-209ENST00000533482 FBRSL1Q9HCM7 1045 aaKnown RBP12.35□□□□□ -0.43
RAD50-209ENST00000533482 A0A1W2PQ67 120 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 SLC7A4O43246 635 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 OTCP00480 354 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 CES1P23141 567 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 S100A5P33763 92 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 ARL4DP49703 201 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 TRIM16LQ309B1 348 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 ZC3H12BQ5HYM0 836 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 IL23RQ5VWK5 629 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 REP15Q6BDI9 236 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 CBR4Q8N4T8 237 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 CPSF7Q8N684 471 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 OR52E6Q96RD3 313 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 MAGEH1Q9H213 219 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 DDX28Q9NUL7 540 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 YIPF1Q9Y548 306 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 A0A0D9SEW6 157 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 KLF11O14901 512 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 MTX2O75431 263 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 WDR47O94967 919 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 BCL10O95999 233 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 ELFN1P0C7U0 828 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 CDH4P55283 916 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 GALNT2Q10471 571 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 SMARCB1Q12824 385 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 GET4Q7L5D6 327 aaPredicted RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 RBFAQ8N0V3 343 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 TMEM132CQ8N3T6 1108 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 IPPKQ9H8X2 491 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 COPG1Q9Y678 874 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 GLYATL1P3A0A0U1RQE8 302 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 A8MT66 165 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 EFNA1P20827 205 aaPredicted RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 AQP1P29972 269 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 IDH2P48735 452 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 IL10RBQ08334 325 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 MAPK11Q15759 364 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 LIN52Q52LA3 116 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 FAM9CQ8IZT9 166 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 CLDN19Q8N6F1 224 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 NPWQ8N729 165 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 CNTD1Q8N815 330 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 MIPEPQ99797 713 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 TMLHEQ9NVH6 421 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 STRCQ7RTU9 1775 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 MYH4Q9Y623 1939 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 MTMR11A4FU01 709 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 CDK14O94921 469 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 ZBTB11O95625 1053 aaPredicted RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 CAPN1P07384 714 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 GSTM1P09488 218 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 GPR107Q5VW38 600 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 ANO7Q6IWH7 933 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 PNPT1Q8TCS8 783 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 BRSK1Q8TDC3 778 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 SKA1Q96BD8 255 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 APOLD1Q96LR9 279 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 PPP3R2Q96LZ3 170 aa12.34□□□□□ -0.43
RAD50-209ENST00000533482 ZCCHC2Q9C0B9 1178 aaKnown RBP12.34□□□□□ -0.43
RAD50-209ENST00000533482 MAP3K13O43283 966 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 GKP32189 559 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 PRKAG1P54619 331 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 NR1H2P55055 460 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 LCP2Q13094 533 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 TRIM25Q14258 630 aaKnown RBP12.33□□□□□ -0.44
RAD50-209ENST00000533482 PLA2G4EQ3MJ16 856 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 ARMC6Q6NXE6 501 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 LRRTM3Q86VH5 581 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 OFCC1Q8IZS5 231 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 CMTM8Q8IZV2 173 aa12.33□□□□□ -0.44
RAD50-209ENST00000533482 PLEKHA8Q96JA3 519 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms