RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 LRRC66Q68CR7 880 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 RFX8Q6ZV50 586 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 TECPR1Q7Z6L1 1165 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 SYVN1Q86TM6 617 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 TSPAN33Q86UF1 283 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 NLRP8Q86W28 1048 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 TRIM48Q8IWZ4 208 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 SRRM1Q8IYB3 904 aaKnown RBP10.31□□□□□ -0.76
COPB1-207ENST00000529866 SLC34A3Q8N130 599 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 CT55Q8WUE5 264 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 NSMCE1Q8WV22 266 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 RNF31Q96EP0 1072 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 MCEEQ96PE7 176 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 TGM7Q96PF1 710 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 NUDCD1Q96RS6 583 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 TBC1D10AQ9BXI6 508 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 ING2Q9H160 280 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 RMI1Q9H9A7 625 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 UCK1Q9HA47 277 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 PDE7BQ9NP56 450 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 MLXIPLQ9NP71 852 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 ERRFI1Q9UJM3 462 aaPredicted RBP10.31□□□□□ -0.76
COPB1-207ENST00000529866 DNPEPQ9ULA0 475 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 AP4E1Q9UPM8 1137 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 KCNK6Q9Y257 313 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 SLC5A6Q9Y289 635 aa10.31□□□□□ -0.76
COPB1-207ENST00000529866 F8P00451 2351 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 ARGFXA6NJG6 315 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 LGALS16A8MUM7 142 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 UBXN7O94888 489 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 PGLSO95336 258 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 TYRP1P17643 537 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 PTPN4P29074 926 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 CCL11P51671 97 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 RPS15P62841 145 aaKnown RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 PDE1BQ01064 536 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 SLC10A7Q0GE19 358 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 TRAF2Q12933 501 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 CLEC16AQ2KHT3 1053 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 PRR30Q53SZ7 412 aaPredicted RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 ZRANB3Q5FWF4 1079 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 CT47A1Q5JQC4 288 aaPredicted RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 C1QL3Q5VWW1 255 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 JMJD6Q6NYC1 403 aaPredicted RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 DCUN1D2Q6PH85 259 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 ARHGAP36Q6ZRI8 547 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 MON1BQ7L1V2 547 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 PRSS42Q7Z5A4 293 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 ARHGAP12Q8IWW6 846 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 RHOT1Q8IXI2 618 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 SCAMP4Q969E2 229 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 PNPLA2Q96AD5 504 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 TCTN2Q96GX1 697 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 COX14Q96I36 57 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 MGME1Q9BQP7 344 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 ABCG8Q9H221 673 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 DHX35Q9H5Z1 703 aaKnown RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 NOD2Q9HC29 1040 aa10.3□□□□□ -0.76
COPB1-207ENST00000529866 LIMA1Q9UHB6 759 aaKnown RBP10.3□□□□□ -0.76
COPB1-207ENST00000529866 MED13Q9UHV7 2174 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 TTC24A2A3L6 582 aaPredicted RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 DNAJC6O75061 913 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 KRT38O76015 456 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 MTA2O94776 668 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 VIPP01282 170 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 ATP1A3P13637 1013 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 CTPS1P17812 591 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 ERCC2P18074 760 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 CAPZBP47756 277 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 ZNF135P52742 658 aaPredicted RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 EPHB1P54762 984 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 UBE2IP63279 158 aaKnown RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 OGDHQ02218 1023 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 CHAF1BQ13112 559 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 TUBB3Q13509 450 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 ELOAQ14241 798 aaKnown RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 TMEM26Q6ZUK4 368 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 TP53INP2Q8IXH6 220 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 RAVER1Q8IY67 606 aaKnown RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 NPWQ8N729 165 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 ZDHHC12Q96GR4 267 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 NSMCE3Q96MG7 304 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 FCRL4Q96PJ5 515 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 RIOK2Q9BVS4 552 aaKnown RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 OSGEPL1Q9H4B0 414 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 SEPT11Q9NVA2 429 aaKnown RBP10.29□□□□□ -0.76
COPB1-207ENST00000529866 GPATCH2LQ9NWQ4 482 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 LUZP4Q9P127 313 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 RARRES3Q9UL19 164 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 PPIL1Q9Y3C6 166 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 PRKAB1Q9Y478 270 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 OTOGQ6ZRI0 2925 aa10.29□□□□□ -0.76
COPB1-207ENST00000529866 MTORP42345 2549 aa10.28□□□□□ -0.76
COPB1-207ENST00000529866 SSU72P8A0A1W2PR75 194 aa10.28□□□□□ -0.76
COPB1-207ENST00000529866 HNRNPRO43390 633 aaKnown RBP10.28□□□□□ -0.76
COPB1-207ENST00000529866 GRID2O43424 1007 aa10.28□□□□□ -0.76
COPB1-207ENST00000529866 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms