RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HFM1A2PYH4 1435 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 UTYO14607 1347 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 GTPBP1O00178 669 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 TAF4O00268 1085 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 CYC1P08574 325 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 FCGR1AP12314 374 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 P4HA1P13674 534 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 GPTP24298 496 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 HNRNPH1P31943 449 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 HPDP32754 393 aaPredicted RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 STX2P32856 288 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 ACTN2P35609 894 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 ATP6V1E1P36543 226 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 EIF2S3P41091 472 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 CD86P42081 329 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 COMPP49747 757 aaPredicted RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 HSD17B7P56937 341 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 UBASH3AP57075 661 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 NAE1Q13564 534 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 DHX34Q14147 1143 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 EFNB3Q15768 340 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 TBCEQ15813 527 aaPredicted RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 XKR9Q5GH70 373 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 EFHC1Q5JVL4 640 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 HAUS3Q68CZ6 603 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 KIAA1161Q6NSJ0 714 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 ANKRD54Q6NXT1 300 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 CCDC73Q6ZRK6 1079 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 QSOX2Q6ZRP7 698 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 MTSS1LQ765P7 747 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 EPHX4Q8IUS5 362 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 LILRB1Q8NHL6 650 aaPredicted RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 MGARPQ8TDB4 240 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 PSPC1Q8WXF1 523 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 RND1Q92730 232 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 TSGA13Q96PP4 275 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 FIZ1Q96SL8 496 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 GPATCH1Q9BRR8 931 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 DESI2Q9BSY9 194 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 NDST4Q9H3R1 872 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 AAR2Q9Y312 384 aaKnown RBP5.85□□□□□ -1.47
PCF11-202ENST00000528336 CEPT1Q9Y6K0 416 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 FAM135AQ9P2D6 1515 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 NAIPQ13075 1403 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 CNTLNQ9NXG0 1405 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 A0A0U1RQJ8 604 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 TMEM202A6NGA9 273 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 PTP4A3O75365 173 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 SEC14L2O76054 403 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 KRT10P13645 584 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 IL7RP16871 459 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 CHMP24386 653 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 CDAP32320 146 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 PIP4K2AP48426 406 aaPredicted RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 RPS3AP61247 264 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 TRIM29Q14134 588 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 FRG1Q14331 258 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 DRAP1Q14919 205 aaPredicted RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 EIF2S3LQ2VIR3 472 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 NADSYN1Q6IA69 706 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 TSSK4Q6SA08 328 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 CREB3L2Q70SY1 520 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 GSTA5Q7RTV2 222 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 CCDC13Q8IYE1 715 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 ETNPPLQ8TBG4 499 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 SMARCE1Q969G3 411 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 JAKMIP2Q96AA8 810 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 SLITRK1Q96PX8 696 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 CSF3RQ99062 836 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 KXD1Q9BQD3 176 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 MMTAG2Q9BU76 263 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 XAB2Q9HCS7 855 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 NOX4Q9NPH5 578 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 MKKSQ9NPJ1 570 aaPredicted RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 ASAH2Q9NR71 780 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 HAUS2Q9NVX0 235 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 TRMT1Q9NXH9 659 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 BLOC1S6Q9UL45 172 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 STON1Q9Y6Q2 735 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 ADAMTSL3P82987 1691 aa5.84□□□□□ -1.47
PCF11-202ENST00000528336 RNF17Q9BXT8 1623 aaKnown RBP5.84□□□□□ -1.47
PCF11-202ENST00000528336 ATXN2Q99700 1313 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 H0Y626 953 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 WNT9BO14905 357 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 SLC7A4O43246 635 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 MT-ND3P03897 115 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 HSPA1AP0DMV8 641 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 HSPA1BP0DMV9 641 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 PORP16435 677 aaPredicted RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 DESP17661 470 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 RPL7AP62424 266 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 GRSF1Q12849 480 aaKnown RBP eCLIP5.83□□□□□ -1.48
PCF11-202ENST00000528336 MYBPHQ13203 477 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 RASA2Q15283 850 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 KRTCAP3Q53RY4 240 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 PAPPA-AS1Q5QFB9 102 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 RUSC1-AS1Q66K80 236 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 ZNF324BQ6AW86 544 aaPredicted RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 RHBDF2Q6PJF5 856 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms