RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 UPP2O95045 317 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 STAMBPO95630 424 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 ESRRBO95718 433 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 CHEK2O96017 543 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 MT-CO1P00395 513 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 HSPA8P11142 646 aaKnown RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 RHOAP61586 193 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 AP1S1P61966 158 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 CACNG1Q06432 222 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 RAB33AQ14088 237 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 SPATS1Q496A3 300 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 LILRA2Q8N149 483 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 CARNMT1Q8N4J0 409 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 TMEM102Q8N9M5 508 aaPredicted RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 TUBGCP3Q96CW5 907 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PDLIM5Q96HC4 596 aaKnown RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 GPATCH1Q9BRR8 931 aaKnown RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 IL17CQ9P0M4 197 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 DNMT3BQ9UBC3 853 aaKnown RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 POLG2Q9UHN1 485 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PCTPQ9UKL6 214 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 IKZF3Q9UKT9 509 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 MAFFQ9ULX9 164 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 OR51B4Q9Y5P0 310 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 TCRBV3S1A0A5B6 114 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PRORSD1PA6NEY8 169 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 GFRA2O00451 464 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 NIPSNAP2O75323 286 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 CRCPO75575 148 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PRR35P0CG20 571 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 ZCCHC18P0CG32 403 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 UROSP10746 265 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 HMGCLP35914 325 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 CCL23P55773 120 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PDK3Q15120 406 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 LINGO4Q6UY18 593 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 CERS6Q6ZMG9 384 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.23■□□□□ 0.03
USH1C-207ENST00000527720 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 MINDY1Q8N5J2 469 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 DCAF4L2Q8NA75 395 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 FAM156AQ8NDB6 213 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.23■□□□□ 0.03
USH1C-207ENST00000527720 GCNAQ96QF7 691 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 PKP2Q99959 881 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 SEMA4BQ9NPR2 832 aaPredicted RBP15.23■□□□□ 0.03
USH1C-207ENST00000527720 ZNF711Q9Y462 761 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 AP4S1Q9Y587 144 aa15.23■□□□□ 0.03
USH1C-207ENST00000527720 E5RI56 91 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 H0YJX3 145 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 KIF3CO14782 793 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 FKTNO75072 461 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 HGFP14210 728 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 MZF1P28698 734 aaPredicted RBP15.22■□□□□ 0.03
USH1C-207ENST00000527720 EPHB3P54753 998 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 FOXM1Q08050 763 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 TWF1Q12792 350 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 IKBKEQ14164 716 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GRB7Q14451 532 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 MAP7D1Q3KQU3 841 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 ANKRD33Q7Z3H0 272 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GPSM1Q86YR5 675 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 FAM217AQ8IXS0 508 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 TCEAL8Q8IYN2 117 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 SIDT2Q8NBJ9 832 aaKnown RBP15.22■□□□□ 0.03
USH1C-207ENST00000527720 OR56A4Q8NGH8 313 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 PBXIP1Q96AQ6 731 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 LINGO1Q96FE5 620 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GBP5Q96PP8 586 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 SMIM14Q96QK8 99 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 KCNA7Q96RP8 456 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 SLC30A3Q99726 388 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 YIPF3Q9GZM5 350 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 P2RY12Q9H244 342 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GPBP1L1Q9HC44 474 aaPredicted RBP15.22■□□□□ 0.03
USH1C-207ENST00000527720 BPIFA1Q9NP55 256 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 TMEM45AQ9NWC5 275 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GALPQ9UBC7 116 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 ABCD2Q9UBJ2 740 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 LTBP2Q14767 1821 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 PRRG1O14668 218 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GIPC1O14908 333 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 ANGPT2O15123 496 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 OR1I1O60431 355 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 SNX2O60749 519 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 OLFM2O95897 454 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 CHRM3P20309 590 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 CHN2P52757 468 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 RNF220Q5VTB9 566 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 Q6ZNB5 142 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 TMEM150AQ86TG1 271 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 EEF1AKMT1Q8WVE0 214 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 ALG14Q96F25 216 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 TMEM169Q96HH4 297 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 ZNF558Q96NG5 402 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 EFHD1Q9BUP0 239 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 GID8Q9NWU2 228 aa15.22■□□□□ 0.03
USH1C-207ENST00000527720 NUDT4Q9NZJ9 180 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms