RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 AGPAT1Q99943 283 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 SLC25A23Q9BV35 468 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 ACTL8Q9H568 366 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 ZNF768Q9H5H4 540 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 ZNF106Q9H2Y7 1883 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 TCP11X1B4DZS4 312 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 PRPSAP2O60256 369 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 MAFKO60675 156 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 SPAG6O75602 509 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 SORBS2O94875 1100 aaKnown RBP12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 UBXN7O94888 489 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 RECKO95980 971 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 ZNF30P17039 623 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 AMD1P17707 334 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 MIPP30301 263 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 MMP13P45452 471 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 EPHB1P54762 984 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 RALGPS1Q5JS13 557 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 PHYKPLQ8IUZ5 450 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 ATPAF2Q8N5M1 289 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 AVL9Q8NBF6 648 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 NSMCE1Q8WV22 266 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 PLEKHG4BQ96PX9 1271 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 RUFY1Q96T51 708 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 OSGEPL1Q9H4B0 414 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 LHX9Q9NQ69 397 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 LUZP4Q9P127 313 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 MAP10Q9P2G4 905 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 CNOT6Q9ULM6 557 aaKnown RBP12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 SLC30A1Q9Y6M5 507 aa12.84□□□□□ -0.35
CLNS1A-207ENST00000527133 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 A0A0J9YYE9 177 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 C21orf140B9A014 251 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TOX3O15405 576 aaPredicted RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 GRID2O43424 1007 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 FZD6O60353 706 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 RNF8O76064 485 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TIAF1O95411 115 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 CLDN1O95832 211 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TRBC1P01850 177 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 MT-ND3P03897 115 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 FGF5P12034 268 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 HCAR3P49019 387 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 CCL11P51671 97 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 RPS18P62269 152 aaKnown RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 MAMLD1Q13495 774 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 INPP5JQ15735 1006 aaPredicted RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 MARC1Q5VT66 337 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TMEM26Q6ZUK4 368 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 PPP1R3BQ86XI6 285 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TRIM48Q8IWZ4 208 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 BRD8Q9H0E9 1235 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 ZWILCHQ9H900 591 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 RMI1Q9H9A7 625 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 UCK1Q9HA47 277 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 NT5MQ9NPB1 228 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 ACSS2Q9NR19 701 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 PARVAQ9NVD7 372 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 ETNK2Q9NVF9 386 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 TAS2R14Q9NYV8 317 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 SCHIP1Q9P0W5 487 aaPredicted RBP12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 SIK3Q9Y2K2 1263 aa12.83□□□□□ -0.36
CLNS1A-207ENST00000527133 ARGFXA6NJG6 315 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 FADS2P1A8MWK0 482 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 H3BRJ5 948 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 CLDN7O95471 211 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 VIPP01282 170 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 AMPD1P23109 780 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 CDH6P55285 790 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 ITKQ08881 620 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 KRT31Q15323 416 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 UGT8Q16880 541 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 CACHD1Q5VU97 1274 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 FAM92BQ6ZTR7 304 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 PSTKQ8IV42 348 aaKnown RBP12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 THAP4Q8WY91 577 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 RSC1A1Q92681 617 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 WDR24Q96S15 920 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 SLC29A3Q9BZD2 475 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 TRIM7Q9C029 511 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 ING2Q9H160 280 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 ARFGAP3Q9NP61 516 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 PCDHGA9Q9Y5G4 932 aaKnown RBP12.82□□□□□ -0.36
CLNS1A-207ENST00000527133 FBN2P35556 2912 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms