RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 IL26Q9NPH9 171 aa20.69■□□□□ 0.9
TRAPPC9-215ENST00000524162 SPATS2LQ9NUQ6 558 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-215ENST00000524162 SMOXQ9NWM0 555 aa20.69■□□□□ 0.9
TRAPPC9-215ENST00000524162 ST14Q9Y5Y6 855 aa20.69■□□□□ 0.9
TRAPPC9-215ENST00000524162 FAM149AA5PLN7 773 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 C2orf81A6NN90 581 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 CRTAMO95727 393 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 LPOP22079 712 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 ITGA9Q13797 1035 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 ST3GAL2Q16842 350 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 DENND5AQ6IQ26 1287 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 TRIM74Q86UV6 250 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 ANP32BQ92688 251 aaKnown RBP20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 PDLIM2Q96JY6 352 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 TBL1YQ9BQ87 522 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 CCDC3Q9BQI4 270 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 CCDC86Q9H6F5 360 aaKnown RBP20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 HOMER3Q9NSC5 361 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 DRG1Q9Y295 367 aaKnown RBP20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 JRKLQ9Y4A0 524 aa20.68■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZW10O43264 779 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 AP2A1O95782 977 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 ATP1A1P05023 1023 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 GPR3P46089 330 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 GDF10P55107 478 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 KIF26BQ2KJY2 2108 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 C4orf22Q6V702 233 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 RBM44Q6ZP01 1051 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 LINC00523Q86TU6 105 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZDHHC1Q8WTX9 485 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZCCHC14Q8WYQ9 949 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 SIRPGQ9P1W8 387 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 ATXN10Q9UBB4 475 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 GPSM3Q9Y4H4 160 aa20.67■□□□□ 0.9
TRAPPC9-215ENST00000524162 GLYATL1P3A0A0U1RQE8 302 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 AGAP14A8MT82 685 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 F5H423 210 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 TMX2-CTNND1H3BSU7 103 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 STX7O15400 261 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZSCAN12O43309 604 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 GRID2O43424 1007 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 KCNJ13O60928 360 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 METTL18O95568 372 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 AK4P27144 223 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ACTR1BP42025 376 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 FASLGP48023 281 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ACTR1AP61163 376 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 SIX1Q15475 284 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ISXQ2M1V0 245 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ATP13A5Q4VNC0 1218 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 LDLRAP1Q5SW96 308 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ALS2CLQ60I27 953 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 IGF2-ASQ6U949 168 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ADGRG6Q86SQ4 1221 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 PROSER1Q86XN7 944 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 NAGSQ8N159 534 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ATG4AQ8WYN0 398 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 CCDC74AQ96AQ1 378 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZCCHC2Q9C0B9 1178 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZNHIT2Q9UHR6 403 aa20.66■□□□□ 0.9
TRAPPC9-215ENST00000524162 OR5K4A6NMS3 321 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 B4DGG1 531 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 GAPDHSO14556 408 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 SLC4A1P02730 911 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 SLC2A4P14672 509 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZNF8P17098 575 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 PSMA3P25788 255 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 ACTN2P35609 894 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 FDFT1P37268 417 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 HADHAP40939 763 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 SQSTM1Q13501 440 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 SPIDRQ14159 915 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 SLC30A9Q6PML9 568 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 MARK2Q7KZI7 788 aaKnown RBP20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 AVL9Q8NBF6 648 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 DDHD1Q8NEL9 900 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 TIMM29Q9BSF4 260 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 BPIFA1Q9NP55 256 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 LRIT1Q9P2V4 623 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 TMPRSS11EQ9UL52 423 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 ZNF148Q9UQR1 794 aa20.65■□□□□ 0.9
TRAPPC9-215ENST00000524162 KLHL33A6NCF5 533 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 A6NCN8 305 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 PRR19A6NJB7 356 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 KMOO15229 486 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 CSO75390 466 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 DXOO77932 396 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 SUN1O94901 812 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 MSNP26038 577 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 MLLT3P42568 568 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 TCEA2Q15560 299 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 SPRED1Q7Z699 444 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 LSMEM2Q8N112 164 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 SFRP1Q8N474 314 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 ARL14Q8N4G2 192 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 OR2AG1Q9H205 316 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 RABGEF1Q9UJ41 708 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZMIZ1Q9ULJ6 1067 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 TTC7AQ9ULT0 858 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 DNMT3AQ9Y6K1 912 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms