RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 FGF3P11487 239 aaPredicted RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SLC5A3P53794 718 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 DOK6Q6PKX4 331 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 OXSMQ9NWU1 459 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 NPEPPSL1A6NEC2 478 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 FTH1P02794 183 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 LMO2P25791 158 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SCNN1AP37088 669 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 INHBEP58166 350 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 DSC2Q02487 901 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 PPM1LQ5SGD2 360 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF438Q7Z4V0 828 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 VN1R5Q7Z5H4 357 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 POC5Q8NA72 575 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 UBASH3BQ8TF42 649 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SLC47A1Q96FL8 570 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 PCED1BQ96HM7 432 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 TSSK3Q96PN8 268 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SPRTNQ9H040 489 aaPredicted RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CRNNQ9UBG3 495 aaPredicted RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 ANGPT4Q9Y264 503 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 U3KQV3 271 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CXCR2P25025 360 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 IL12RB1P42701 662 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PRKAG1P54619 331 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 NRG1Q02297 640 aaPredicted RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 DLG1Q12959 904 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 LCP2Q13094 533 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 SPIDRQ14159 915 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 TAC4Q86UU9 113 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 ATAD1Q8NBU5 361 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 GPR156Q8NFN8 814 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 BORCS5Q969J3 196 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 SIGLEC10Q96LC7 697 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 GPR21Q99679 349 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 A0A088AWK7 358 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 DYRK3O43781 588 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PDE9AO76083 593 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PSMA3P25788 255 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 GRIA1P42261 906 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 CLCQ05315 142 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 TSTD2Q5T7W7 516 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 MFSD4BQ5TF39 518 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 ARMC3Q5W041 872 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 HIPK1Q86Z02 1210 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 DENND6AQ8IWF6 608 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 CBR4Q8N4T8 237 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 HEXDCQ8WVB3 486 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 ATP6V1HQ9UI12 483 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PCDHB1Q9Y5F3 818 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 EPORP19235 508 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PPIBP23284 216 aaKnown RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 JAK1P23458 1154 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 CDK9P50750 372 aaKnown RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 IRF9Q00978 393 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 SP2Q02086 613 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 USP41Q3LFD5 358 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 CYP20A1Q6UW02 462 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 FRMD7Q6ZUT3 714 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 Q96MT0 163 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 FBXW11Q9UKB1 542 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PSME2Q9UL46 239 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 ERGIC3Q9Y282 383 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 MYBPHLA2RUH7 354 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 SNNO75324 88 aaPredicted RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 GPIP06744 558 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 LIPEQ05469 1076 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 PSMA8Q8TAA3 256 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 DEPDC7Q96QD5 511 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 KLHL1Q9NR64 748 aa13.74□□□□□ -0.21
SYNPO-205ENST00000522122 SMPD3Q9NY59 655 aaPredicted RBP13.74□□□□□ -0.21
SYNPO-205ENST00000522122 NTSP30990 170 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 GSTM5P46439 218 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 COX10Q12887 443 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 DUSP4Q13115 394 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 OLFML1Q6UWY5 402 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 USP7Q93009 1102 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CENPNQ96H22 339 aaPredicted RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ACBD6Q9BR61 282 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 USP29Q9HBJ7 922 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 GMIPQ9P107 970 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 FAM149AA5PLN7 773 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CCL22O00626 93 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 SUV39H1O43463 412 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 NADKO95544 446 aaPredicted RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 UMPSP11172 480 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TPP2P29144 1249 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms