RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TDRD12Q587J7 1177 aaKnown RBP11.37□□□□□ -0.59
MRPS28-206ENST00000520946 PPP1R3BQ86XI6 285 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 LPCAT1Q8NF37 534 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 PIH1D2Q8WWB5 315 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 ZDHHC12Q96GR4 267 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 SLC25A23Q9BV35 468 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 FAM83DQ9H4H8 585 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 MRPL47Q9HD33 250 aaKnown RBP11.37□□□□□ -0.59
MRPS28-206ENST00000520946 ACSS2Q9NR19 701 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 KLC4Q9NSK0 619 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.37□□□□□ -0.59
MRPS28-206ENST00000520946 CHKBQ9Y259 395 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 SIK3Q9Y2K2 1263 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 PPIL1Q9Y3C6 166 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 SCINQ9Y6U3 715 aa11.37□□□□□ -0.59
MRPS28-206ENST00000520946 A0A0J9YYE9 177 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 C1orf232A0A0U1RR37 186 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 A1L4Q6 167 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 TMEM191CA6NGB0 347 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 LILRA5A6NI73 299 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 K7EM74 188 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 TOX3O15405 576 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-206ENST00000520946 MAFKO60675 156 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 LRCH4O75427 683 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 SLC25A14O95258 325 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-206ENST00000520946 CLDN7O95471 211 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 SOD1P00441 154 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 TRBC1P01850 177 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 ZNF28P17035 718 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 STC1P52823 247 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 GFERP55789 205 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 RPS15P62841 145 aaKnown RBP11.36□□□□□ -0.59
MRPS28-206ENST00000520946 DNASE1L3Q13609 305 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 SEPT7Q16181 437 aaKnown RBP11.36□□□□□ -0.59
MRPS28-206ENST00000520946 ANKRD20A8PQ5CZ79 823 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 CACHD1Q5VU97 1274 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 PLEKHA7Q6IQ23 1121 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 TIGD7Q6NT04 549 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-206ENST00000520946 IRGCQ6NXR0 463 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 LRRC49Q8IUZ0 686 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 CXorf40BQ96DE9 158 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 TRIM11Q96F44 468 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 COX14Q96I36 57 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 SPATA16Q9BXB7 569 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 SLC29A3Q9BZD2 475 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 CARD9Q9H257 536 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 CASS4Q9NQ75 786 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 FANCLQ9NW38 375 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
MRPS28-206ENST00000520946 MN1Q10571 1320 aaPredicted RBP11.35□□□□□ -0.59
MRPS28-206ENST00000520946 LGALS16A8MUM7 142 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 C21orf140B9A014 251 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 SPAG6O75602 509 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 FTLP02792 175 aaPredicted RBP11.35□□□□□ -0.59
MRPS28-206ENST00000520946 ZNF165P49910 485 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 CCL11P51671 97 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 SH3BP2P78314 561 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 ASIC2Q16515 512 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 PLA2G4EQ3MJ16 856 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 CDKAL1Q5VV42 579 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
MRPS28-206ENST00000520946 CRTC3Q6UUV7 619 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 FAM92BQ6ZTR7 304 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 TMEM26Q6ZUK4 368 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 POLNQ7Z5Q5 900 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 TMEM135Q86UB9 458 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 ARFGAP1Q8N6T3 406 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 THAP4Q8WY91 577 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 CSPG4P5Q96PW8 444 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 PLEKHG4BQ96PX9 1271 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 ADGRE3Q9BY15 652 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 OR2AG1Q9H205 316 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 PCDH9Q9HC56 1237 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 SLAMF7Q9NQ25 335 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 RBM22Q9NW64 420 aaKnown RBP eCLIP11.35□□□□□ -0.59
MRPS28-206ENST00000520946 RARRES3Q9UL19 164 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 DNAJC16Q9Y2G8 782 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 LRRK2Q5S007 2527 aa11.35□□□□□ -0.59
MRPS28-206ENST00000520946 SPTAN1Q13813 2472 aaKnown RBP11.34□□□□□ -0.59
MRPS28-206ENST00000520946 NUAK1O60285 661 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 DNAJB5O75953 348 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 RECKO95980 971 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 PEX11BO96011 259 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 C9P02748 559 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 FURINP09958 794 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 VCLP18206 1134 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 XRCC1P18887 633 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-206ENST00000520946 VARSP26640 1264 aaKnown RBP11.34□□□□□ -0.59
MRPS28-206ENST00000520946 PCK1P35558 622 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 LEPRP48357 1165 aaKnown RBP11.34□□□□□ -0.59
MRPS28-206ENST00000520946 SPINT3P49223 89 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
MRPS28-206ENST00000520946 DSC2Q02487 901 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 SEMA5AQ13591 1074 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 DPYSL2Q16555 572 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 ZNF569Q5MCW4 686 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 ALS2CLQ60I27 953 aa11.34□□□□□ -0.59
MRPS28-206ENST00000520946 KLHL35Q6PF15 583 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms