RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 C3orf30Q96M34 536 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 FIZ1Q96SL8 496 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 SH3GL2Q99962 352 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 CSTL1Q9H114 145 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 HRH4Q9H3N8 390 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 HIF1ANQ9NWT6 349 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 PAM16Q9Y3D7 125 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 RPS6KL1Q9Y6S9 549 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 SRCAPQ6ZRS2 3230 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 KDM6BO15054 1643 aa4.5□□□□□ -1.69
CTNNA1-222ENST00000520400 A0A1W2PP11 408 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 SMAD9O15198 467 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 P4HA2O15460 535 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 CENPBP07199 599 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 NGFRP08138 427 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 DDX5P17844 614 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 S1PR1P21453 382 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 UGT1A1P22309 533 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 HRH2P25021 359 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 PRCPP42785 496 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 MSH2P43246 934 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 RAD23BP54727 409 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 ZBED6P86452 979 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 PPP2R2BQ00005 443 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 LTBQ06643 244 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 SLC20A2Q08357 652 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 ATP13A5Q4VNC0 1218 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 FRG2Q64ET8 278 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 C18orf63Q68DL7 685 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 RGMBQ6NW40 437 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 BRAT1Q6PJG6 821 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 CACNA2D4Q7Z3S7 1137 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 TEX11Q8IYF3 940 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 TAGAPQ8N103 731 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 SLC20A1Q8WUM9 679 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 ERP27Q96DN0 273 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 HARBI1Q96MB7 349 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 CEP295NLQ96MC4 621 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 MAK16Q9BXY0 300 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 LRRC4Q9HBW1 653 aa4.49□□□□□ -1.69
CTNNA1-222ENST00000520400 ATXN2Q99700 1313 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 WIZO95785 1651 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 LNP1A1A4G5 178 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 MYMKA6NI61 221 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 ZNF217O75362 1048 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 DAB1O75553 588 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 TSPAN9O75954 239 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 NR2F1P10589 423 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 HLA-DOBP13765 273 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 PRLRP16471 622 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 TMEM11P17152 192 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 ITGA2P17301 1181 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 IL11P20809 199 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 CDKN2AP42771 156 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 THBS3P49746 956 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 ISL1P61371 349 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 CXCL9Q07325 125 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 KIF5AQ12840 1032 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 DLG1Q12959 904 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 KRTCAP3Q53RY4 240 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 BMP2KLQ5H9B9 411 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 ARMC9Q7Z3E5 817 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 RBM23Q86U06 439 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 GLCCI1Q86VQ1 547 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 C1orf87Q8N0U7 546 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 TANKQ92844 425 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 ABTB1Q969K4 478 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 TAAR8Q969N4 342 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 MTERF1Q99551 399 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 MAGIXQ9H6Y5 334 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 MBNL1Q9NR56 388 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 KLHL9Q9P2J3 617 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 STK39Q9UEW8 545 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 TMEM5Q9Y2B1 443 aa4.48□□□□□ -1.69
CTNNA1-222ENST00000520400 ZNF608Q9ULD9 1512 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 SCN5AQ14524 2016 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 LOC102723996A0A087X1L8 192 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 C5orf60A6NFR6 353 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 HMGB1P1B2RPK0 211 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 MAP2K7O14733 419 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 ANKRD28O15084 1053 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 SPINT2O43291 252 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 CREG1O75629 220 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 RFPL2O75678 378 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 ZBTB11O95625 1053 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 PMS2P2O95744 297 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 SRCP12931 536 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 MYOD1P15172 320 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 CLCNKAP51800 687 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 PNLIPRP2P54317 469 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 FOXG1P55316 489 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 TFAP4Q01664 338 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 NUCB1Q02818 461 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 FOXM1Q08050 763 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 GRAPQ13588 217 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 RAB6CQ53S08 254 aa4.47□□□□□ -1.69
CTNNA1-222ENST00000520400 DCST1Q5T197 706 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms