RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 PAPOLAP51003 745 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 SCNN1BP51168 640 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 TPI1P60174 286 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 RPS18P62269 152 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 TRAF2Q12933 501 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 PTP4A2Q12974 167 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 NAA30Q147X3 362 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 RALGPS1Q5JS13 557 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 ZNF517Q6ZMY9 492 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 TMEM26Q6ZUK4 368 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 MARK2Q7KZI7 788 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 PHLDB2Q86SQ0 1253 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 TSPAN33Q86UF1 283 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 ZC3H18Q86VM9 953 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 NPWQ8N729 165 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 PAF1Q8N7H5 531 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 GLIS1Q8NBF1 620 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 AP2M1Q96CW1 435 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 CELF6Q96J87 481 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 ZNF599Q96NL3 588 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 NUDCD1Q96RS6 583 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 RUFY1Q96T51 708 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 MGME1Q9BQP7 344 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 C11orf70Q9BRQ4 267 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 NUDT9Q9BW91 350 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 SLC39A8Q9C0K1 460 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 ABCG8Q9H221 673 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 RMI1Q9H9A7 625 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 LUZP4Q9P127 313 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 EPHA6Q9UF33 1036 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 G3BP2Q9UN86 482 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 TMEM98Q9Y2Y6 226 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 FER1L5A0AVI2 2057 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 ABCA2Q9BZC7 2435 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 ZGRF1Q86YA3 2104 aa8.29□□□□□ -1.08
CTNNA1-215ENST00000519309 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SPG11Q96JI7 2443 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SVILO95425 2214 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 TRBV23OR9-2A0A075B6M9 112 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 TCRBV5S1A1TA0A578 114 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 HEATR9A2RTY3 570 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ANKUB1A6NFN9 424 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 UBXN7O94888 489 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 PGLSO95336 258 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 KRT3P12035 628 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ZNF30P17039 623 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 NELFEP18615 380 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 XRCC1P18887 633 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ANP32AP39687 249 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 KLK7P49862 253 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SEPHS1P49903 392 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 CCL11P51671 97 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ZNF143P52747 638 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ITGA1P56199 1179 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 FMO1Q01740 532 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 MAN2A1Q16706 1144 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 VWA3BQ502W6 1294 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 IZUMO3Q5VZ72 239 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 LRRC66Q68CR7 880 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 DENND2CQ68D51 928 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 WDR59Q6PJI9 974 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 TRIM72Q6ZMU5 477 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 RBM43Q6ZSC3 357 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 FDCSPQ8NFU4 85 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SLC20A1Q8WUM9 679 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 RSC1A1Q92681 617 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 C19orf60Q96EN9 201 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 RNF31Q96EP0 1072 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SLC41A2Q96JW4 573 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 TGM7Q96PF1 710 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 RANBP9Q96S59 729 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 TUBGCP2Q9BSJ2 902 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 UNKQ9C0B0 810 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 RAB33BQ9H082 229 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 NDST4Q9H3R1 872 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ASF1BQ9NVP2 202 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 TAB2Q9NYJ8 693 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 GPR83Q9NYM4 423 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 C5AR2Q9P296 337 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 KCNK6Q9Y257 313 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 PCDHGC4Q9Y5F7 938 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 ADGRG1Q9Y653 693 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 NAV3Q8IVL0 2385 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SEC16AO15027 2179 aa8.28□□□□□ -1.08
CTNNA1-215ENST00000519309 SIGLEC16A6NMB1 481 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 EPHB6O15197 1021 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 KRT86O43790 486 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 FZD6O60353 706 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 CPNE3O75131 537 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 PEX11BO96011 259 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 UNGP13051 313 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 ACP5P13686 325 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 UCHL3P15374 230 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 ITGA3P26006 1051 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 STC1P52823 247 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 PER3P56645 1201 aa8.27□□□□□ -1.09
CTNNA1-215ENST00000519309 RPS15P62841 145 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms