RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SMAD9O15198 467 aaKnown RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 OGG1O15527 345 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 TSPAN9O75954 239 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 ICAM1P05362 532 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 RB1P06400 928 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 USP8P40818 1118 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 TMPOP42166 694 aaKnown RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 PDE1BQ01064 536 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 MC1RQ01726 317 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 IKQ13123 557 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 ACVR2BQ13705 512 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 PDE1CQ14123 709 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 RAB41Q5JT25 222 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 C18orf63Q68DL7 685 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 KIAA0930Q6ICG6 404 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 PAPD4Q6PIY7 484 aaKnown RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 MCEMP1Q8IX19 187 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF34Q8IZ26 560 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 RNF113BQ8IZP6 322 aaKnown RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 C1orf87Q8N0U7 546 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 CNPY4Q8N129 248 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 HJURPQ8NCD3 748 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 KCNH5Q8NCM2 988 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 LMO3Q8TAP4 145 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 LNX1Q8TBB1 728 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 FIG4Q92562 907 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 ABTB1Q969K4 478 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 ELMOD3Q96FG2 381 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM19Q96HH6 336 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 IGSF21Q96ID5 467 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 NUDCD1Q96RS6 583 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 CMKLR1Q99788 373 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 C1QTNF4Q9BXJ3 329 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 UBTD1Q9HAC8 227 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 VPS28Q9UK41 221 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 FBXL2Q9UKC9 423 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 NENFQ9UMX5 172 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 GPR34Q9UPC5 381 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 EXO1Q9UQ84 846 aaKnown RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM184BQ9Y519 407 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 PCDHGB1Q9Y5G3 927 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 UNC13AQ9UPW8 1703 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 CGNL1Q0VF96 1302 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 PDS5AQ29RF7 1337 aaKnown RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 SAA2-SAA4A0A096LPE2 208 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 A0A1B0GUV1 79 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 DENND3A2RUS2 1198 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 EIF4E1BA6NMX2 242 aaKnown RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF587BE7ETH6 402 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 ANKRD28O15084 1053 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 TMCC2O75069 709 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CAMTA2O94983 1202 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SNRNP70P08621 437 aaKnown RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CLTBP09497 229 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 ANXA7P20073 488 aaKnown RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 PON1P27169 355 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 GPR143P51810 404 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 POU3F1Q03052 451 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 EPS8Q12929 822 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CUL4AQ13619 759 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 IRF3Q14653 427 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 IZUMO4Q1ZYL8 232 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 NSUN5P2Q63ZY6 315 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CFAP161Q6P656 301 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 UNQ6126/PRO20091Q6UXV3 157 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SDCCAG8Q86SQ7 713 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 GPR180Q86V85 440 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SATL1Q86VE3 508 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SLC38A9Q8NBW4 561 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SMRP1Q8NCR6 262 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 HM13Q8TCT9 377 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 PIGTQ969N2 578 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CDCA5Q96FF9 252 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 DACH2Q96NX9 599 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CCDC68Q9H2F9 335 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SLCO5A1Q9H2Y9 848 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 PIGMQ9H3S5 423 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 TRMT1Q9NXH9 659 aaKnown RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 SUCLA2Q9P2R7 463 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 TBC1D29Q9UFV1 150 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF580Q9UK33 172 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF215Q9UL58 517 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-207ENST00000518569 PADI1Q9ULC6 663 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 CMAHPQ9Y471 501 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 PCDHAC2Q9Y5I4 1007 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 PTPRCP08575 1304 aa3.62□□□□□ -1.83
VPS13B-207ENST00000518569 IGHV4OR15-8A0A075B7B6 117 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 A0A0G2JPF8 293 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 PLSCR5A0PG75 271 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 HNRNPCL2B2RXH8 293 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 HNRNPCL3B7ZW38 293 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 K7ENM7 598 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 TPPPO94811 219 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 CSH1P0DML2 217 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 CSH2P0DML3 217 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 HNRNPCL4P0DMR1 293 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 HOXB6P17509 224 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 CORO1AP31146 461 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 MSH2P43246 934 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms