RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 FAF2Q96CS3 445 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PPM1MQ96MI6 270 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 TSGA13Q96PP4 275 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 NUP85Q9BW27 656 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SARS2Q9NP81 518 aaKnown RBP8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 RBM22Q9NW64 420 aaKnown RBP eCLIP8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ANKMY1Q9P2S6 941 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ZNHIT2Q9UHR6 403 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 TMEM184BQ9Y519 407 aaPredicted RBP8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SEC16AO15027 2179 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 OTOGQ6ZRI0 2925 aa8.18□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ANKRD62A6NC57 917 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 OR52A4PA6NMU1 304 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PDE2AO00408 941 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 GAPDHSO14556 408 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 MTSS1O43312 755 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 NUAK1O60285 661 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SNX2O60749 519 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PPFIA2O75334 1257 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 DNAJB5O75953 348 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 RNF8O76064 485 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 STK17BO94768 372 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 C9P02748 559 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CYP2A6P11509 494 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 TYRP1P17643 537 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CSTF2P33240 577 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 HSPA9P38646 679 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CD86P42081 329 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 STAT5AP42229 794 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 NOP2P46087 812 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 UQCRFS1P47985 274 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 MLLT10P55197 1068 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 HHEXQ03014 270 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 KLHL30Q0D2K2 578 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CDC20Q12834 499 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 UBAP2LQ14157 1087 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 GALNT3Q14435 633 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CLPPQ16740 277 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 TSR1Q2NL82 804 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ASTE1Q2TB18 679 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 LCN10Q6JVE6 187 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 WDR74Q6RFH5 385 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 FAM83HQ6ZRV2 1179 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 KDELC2Q7Z4H8 507 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 IL22RA1Q8N6P7 574 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 LPCAT1Q8NF37 534 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SPATA22Q8NHS9 363 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 TRIM55Q9BYV6 548 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 OR2AG1Q9H205 316 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 FBXO8Q9NRD0 319 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SEPT10Q9P0V9 454 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CPNE7Q9UBL6 633 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SHOC2Q9UQ13 582 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 MAN2B2Q9Y2E5 1009 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 APCP25054 2843 aa8.17□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ANKRD66B4E2M5 251 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CHUKO15111 745 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ANKRD17O75179 2603 aaKnown RBP8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 POLQO75417 2590 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ASMTLO95671 621 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 F3P13726 295 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 BPIP17213 487 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CD68P34810 354 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 GJC1P36383 396 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CASRP41180 1078 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 MAPK9P45984 424 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SEPHS1P49903 392 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 CTSCP53634 463 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ITKQ08881 620 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 MN1Q10571 1320 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 KCNAB1Q14722 419 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PTPRCAPQ14761 206 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PLA2G4EQ3MJ16 856 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 RALGPS1Q5JS13 557 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 DCAF12Q5T6F0 453 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PRAMEF17Q5VTA0 474 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ALS2CLQ60I27 953 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 FAM199XQ6PEV8 388 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 FBXO38Q6PIJ6 1188 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 USP45Q70EL2 814 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 GALNT13Q8IUC8 556 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 NRSN1Q8IZ57 195 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 NLGN4XQ8N0W4 816 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SLC38A9Q8NBW4 561 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 GALNT6Q8NCL4 622 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 NLGN4YQ8NFZ3 816 aaPredicted RBP8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 GPR150Q8NGU9 434 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 EXD1Q8NHP7 514 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 STARD8Q92502 1023 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 MIB2Q96AX9 1013 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 ELMO2Q96JJ3 720 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 C9orf72Q96LT7 481 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SLC38A3Q99624 504 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 FAM83DQ9H4H8 585 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 PCDH9Q9HC56 1237 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 KLC4Q9NSK0 619 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 VPS18Q9P253 973 aa8.16□□□□□ -1.1
SCARNA20.3-201ENST00000516913 SAE1Q9UBE0 346 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms