RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SOSTQ9BQB4 213 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 PITPNM3Q9BZ71 974 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 UPF3AQ9H1J1 476 aaKnown RBP1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 EPHX3Q9H6B9 360 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 CHODLQ9H9P2 273 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 MMP25Q9NPA2 562 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 SIX2Q9NPC8 291 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 G6PC2Q9NQR9 355 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 LIMA1Q9UHB6 759 aaKnown RBP1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 GDAQ9Y2T3 454 aa1.32□□□□□ -2.2
RNU6-561P-201ENST00000516222 PABPN1LA6NDY0 278 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 BCL2L11O43521 198 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TRMUO75648 421 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 ZFAND5O76080 213 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 AP2A2O94973 939 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 RAF1P04049 648 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TPOP07202 933 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TRIM27P14373 513 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 LIFP15018 202 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 CAPN2P17655 700 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 ANXA7P20073 488 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 MCCP23508 829 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 DRD3P35462 400 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 PPM1AP35813 382 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 SERPINF1P36955 418 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 WNT5AP41221 380 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 HUNKP57058 714 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TAS2R38P59533 333 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 COG7P83436 770 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 SORDQ00796 357 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 MBTD1Q05BQ5 628 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 COX10Q12887 443 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 RFTN1Q14699 578 aaPredicted RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 NAA25Q14CX7 972 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 PPP2R5BQ15173 497 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 SGO1Q5FBB7 561 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 SULT6B1Q6IMI4 303 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 LRRC8EQ6NSJ5 796 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 PP632Q6XCG6 107 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 Q6ZVH6 145 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 ANO5Q75V66 913 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 FASTKD5Q7L8L6 764 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 CACNA2D4Q7Z3S7 1137 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TBC1D1Q86TI0 1168 aaPredicted RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 NOXA1Q86UR1 476 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 KCNMB4Q86W47 210 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TICAM1Q8IUC6 712 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 Q8N377 158 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 RAB42Q8N4Z0 105 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TMEM57Q8N5G2 664 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 PAF1Q8N7H5 531 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 ATG16L2Q8NAA4 619 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 C11orf65Q8NCR3 313 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 PPP4R1Q8TF05 950 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 AFG1LQ8WV93 481 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 RTP3Q9BQQ7 232 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 CLEC7AQ9BXN2 247 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 IFIH1Q9BYX4 1025 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TKTL2Q9H0I9 626 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 APOBEC3GQ9HC16 384 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 SAYSD1Q9NPB0 183 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 TLR8Q9NR97 1041 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 ABCB10Q9NRK6 738 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 DACT1Q9NYF0 836 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 LRWD1Q9UFC0 647 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 LRCH1Q9Y2L9 728 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 DERAQ9Y315 318 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 RABGAP1Q9Y3P9 1069 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 LSM4Q9Y4Z0 139 aaKnown RBP1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 FLT1P17948 1338 aa1.31□□□□□ -2.2
RNU6-561P-201ENST00000516222 A0A0G2JNG1 304 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 OR5K3A6NET4 321 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TTC36A6NLP5 189 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 PER2O15055 1255 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 NXPH2O95156 264 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 IGHV3-13P01766 116 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TFAP2AP05549 437 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 CST5P28325 142 aaPredicted RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 LIMK2P53671 638 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 PNLIPRP1P54315 467 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TRA2BP62995 288 aaKnown RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 PICALMQ13492 652 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 NAE1Q13564 534 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 HNRNPDQ14103 355 aaKnown RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 KIR2DS5Q14953 304 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 NECTIN1Q15223 517 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 C18orf63Q68DL7 685 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 C17orf99Q6UX52 265 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 RAD9BQ6WBX8 426 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TMEM64Q6YI46 380 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 Q6ZSR9 355 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 GPRIN3Q6ZVF9 776 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 ISCA2Q86U28 154 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 MARCH9Q86YJ5 346 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 HPS6Q86YV9 775 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TMEM178AQ8NBL3 297 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 OR5R1Q8NH85 324 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 HUS1BQ8NHY5 278 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 SUSD6Q92537 303 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 ARSGQ96EG1 525 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms