RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 NEXNQ0ZGT2 675 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 SIGIRRQ6IA17 410 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 ARHGAP11AQ6P4F7 1023 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 DPPA4Q7L190 304 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 NAXEQ8NCW5 288 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 KLHDC9Q8NEP7 349 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 IL17REQ8NFR9 667 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 SAAL1Q96ER3 474 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 RBM4Q9BWF3 364 aaKnown RBP3.72□□□□□ -1.81
LINC01088-211ENST00000515597 PAIP1Q9H074 479 aaKnown RBP3.72□□□□□ -1.81
LINC01088-211ENST00000515597 SLC25A18Q9H1K4 315 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 PRKRIP1Q9H875 184 aaPredicted RBP3.72□□□□□ -1.81
LINC01088-211ENST00000515597 SEBOXQ9HB31 216 aaPredicted RBP3.72□□□□□ -1.81
LINC01088-211ENST00000515597 ACSS1Q9NUB1 689 aaPredicted RBP3.72□□□□□ -1.81
LINC01088-211ENST00000515597 INTS6Q9UL03 887 aaKnown RBP3.72□□□□□ -1.81
LINC01088-211ENST00000515597 TMEM98Q9Y2Y6 226 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 CEP170Q5SW79 1584 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 WIZO95785 1651 aa3.71□□□□□ -1.81
LINC01088-211ENST00000515597 CACNA1FO60840 1977 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 DVL1O14640 695 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 PRSS1P07477 247 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 ALDH4A1P30038 563 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 HOXC9P31274 260 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 CTCFP49711 727 aaPredicted RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 DVL1P1P54792 670 aaPredicted RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 EIF3BP55884 814 aaKnown RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 GRIK2Q13002 908 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 OLIG2Q13516 323 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 CCDC96Q2M329 555 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 SIRPB2Q5JXA9 342 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 DCST1Q5T197 706 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 INTS11Q5TA45 600 aaKnown RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 CCDC70Q6NSX1 233 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 TTI2Q6NXR4 508 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 FAM76AQ8TAV0 307 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 PSPC1Q8WXF1 523 aaKnown RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 RRP36Q96EU6 259 aaKnown RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 SCRN2Q96FV2 425 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 ACOX2Q99424 681 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 PCGF1Q9BSM1 259 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 POLR3CQ9BUI4 534 aaPredicted RBP3.71□□□□□ -1.82
LINC01088-211ENST00000515597 PDCL3Q9H2J4 239 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 PREBQ9HCU5 417 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 FAM118AQ9NWS6 357 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 HAO1Q9UJM8 370 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 SYNJ1O43426 1573 aa3.71□□□□□ -1.82
LINC01088-211ENST00000515597 ZCWPW2A0A1B0GU75 182 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 PMS2P5A8MQ11 134 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 SNAP23O00161 211 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 IGHV4-39P01824 125 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 POLR2CP19387 275 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 EPHA8P29322 1005 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 DCTP40126 519 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 APOBEC1P41238 236 aaKnown RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 PIP4K2AP48426 406 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 TUBP50607 506 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 TBX2Q13207 712 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 TMEM30BQ3MIR4 351 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 TMEM35AQ53FP2 167 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 CXorf66Q5JRM2 361 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 JAKMIP3Q5VZ66 844 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 ACAD10Q6JQN1 1059 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 ZNF704Q6ZNC4 412 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 SRBD1Q8N5C6 995 aaKnown RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 PAF1Q8N7H5 531 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 ACVR1CQ8NER5 493 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 HMGCLL1Q8TB92 370 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 APBB2Q92870 758 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 GTF3C6Q969F1 213 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 IGSF8Q969P0 613 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 ZUFSPQ96AP4 578 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 ANKRD9Q96BM1 317 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 PPM1MQ96MI6 270 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 C17orf77Q96MU5 243 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 F2RL3Q96RI0 385 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 LITAFQ99732 161 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 BARHL1Q9BZE3 327 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 UNC45AQ9H3U1 944 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 KIF9Q9HAQ2 790 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 TAS2R10Q9NYW0 307 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 ABI3Q9P2A4 366 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 NAALADL1Q9UQQ1 740 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 CAPN7Q9Y6W3 813 aa3.7□□□□□ -1.82
LINC01088-211ENST00000515597 POLA1P09884 1462 aaPredicted RBP3.7□□□□□ -1.82
LINC01088-211ENST00000515597 IGLV5-45A0A087WSX0 123 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 FAM237AA0A1B0GTK4 181 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 SYNGR3O43761 229 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 ZNF182P17025 639 aaPredicted RBP3.69□□□□□ -1.82
LINC01088-211ENST00000515597 ZNF23P17027 643 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 NR1D1P20393 614 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 ELF1P32519 619 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 KRT9P35527 623 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 UBA7P41226 1012 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 CLDN20P56880 219 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 RPL24P83731 157 aaKnown RBP3.69□□□□□ -1.82
LINC01088-211ENST00000515597 PMP22Q01453 160 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 RUNX1T1Q06455 604 aa3.69□□□□□ -1.82
LINC01088-211ENST00000515597 G3BP1Q13283 466 aaKnown RBP eCLIP3.69□□□□□ -1.82
LINC01088-211ENST00000515597 C18orf63Q68DL7 685 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms