RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 BBS12Q6ZW61 710 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 CHST15Q7LFX5 561 aaPredicted RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 DAAM2Q86T65 1068 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 ZC3H18Q86VM9 953 aaKnown RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 JAMLQ86YT9 394 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 PHYKPLQ8IUZ5 450 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 RCOR2Q8IZ40 523 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 LSM14AQ8ND56 463 aaKnown RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 OR4D9Q8NGE8 314 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 P3H4Q92791 437 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 HAUS1Q96CS2 278 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 CCDC74BQ96LY2 380 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 PLEKHG4BQ96PX9 1271 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 VAT1Q99536 393 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 CMKLR1Q99788 373 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 GPR63Q9BZJ6 419 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 KCNK4Q9NYG8 393 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 UBP1Q9NZI7 540 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 ATXN10Q9UBB4 475 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 TBC1D29Q9UFV1 150 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 FAM153AQ9UHL3 310 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 ZNHIT2Q9UHR6 403 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 KCNK6Q9Y257 313 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 CFAP46Q8IYW2 2715 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 SCN8AQ9UQD0 1980 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 RP1P56715 2156 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 PRAMEF33A0A0G2JMD5 474 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 BTNL10A8MVZ5 291 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 HACD1B0YJ81 288 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 K7ENP7 123 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 APOC4-APOC2K7ER74 178 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 AURKAO14965 403 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 CHUKO15111 745 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 GRID2O43424 1007 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 PRAMEF10O60809 474 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 APOC2P02655 101 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 THRAP10827 490 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 ACP5P13686 325 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 F3P13726 295 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 ZNF8P17098 575 aaPredicted RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 BPIP17213 487 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 HMGCLP35914 325 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 CLCNKAP51800 687 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 LIMK2P53671 638 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 WNT3AP56704 352 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 COPS2P61201 443 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 RHDQ02161 417 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 CFHR1Q03591 330 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 VAC14Q08AM6 782 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 BIRC2Q13490 618 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 TRA2AQ13595 282 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 NOMO1Q15155 1222 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 ARHGAP40Q5TG30 622 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 NKAIN2Q5VXU1 208 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 IYDQ6PHW0 289 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 INO80CQ6PI98 192 aaPredicted RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 ADGRG6Q86SQ4 1221 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 CCDC50Q8IVM0 306 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 TTC30BQ8N4P2 665 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 HTR3CQ8WXA8 447 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 GLYATL1Q969I3 302 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 OXNAD1Q96HP4 312 aaPredicted RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 MRGPRX2Q96LB1 330 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 VPS35Q96QK1 796 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 FCRL5Q96RD9 977 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 DPYSL5Q9BPU6 564 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 B3GNT4Q9C0J1 378 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 RBSNQ9H1K0 784 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 OR2AG1Q9H205 316 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 TRIM39Q9HCM9 518 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 SARS2Q9NP81 518 aaKnown RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 FOXJ2Q9P0K8 574 aa10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 KLHL8Q9P2G9 620 aaPredicted RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 REXO2Q9Y3B8 237 aaKnown RBP10.34□□□□□ -0.75
HMGXB3-205ENST00000514469 PRR19A6NJB7 356 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 EIF4E1BA6NMX2 242 aaKnown RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 C9orf172C9J069 976 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 PJA2O43164 708 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 DUX1O43812 170 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 C1QL1O75973 258 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC25A14O95258 325 aaPredicted RBP10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 EPOP01588 193 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 LIPCP11150 499 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC2A4P14672 509 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 HLA-DPA1P20036 260 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 PTPN7P35236 360 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 MAPK10P53779 464 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 HHEXQ03014 270 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 MPP3Q13368 585 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 XRCC4Q13426 336 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC1A5Q15758 541 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 SIRPB2Q5JXA9 342 aa10.33□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF648Q5T619 568 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms