RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 DCAF12Q5T6F0 453 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 ANKS6Q68DC2 871 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 WDR74Q6RFH5 385 aaPredicted RBP12.08□□□□□ -0.48
SNHG4-208ENST00000514110 ARHGAP22Q7Z5H3 698 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 CACNA2D3Q8IZS8 1091 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 IL22RA1Q8N6P7 574 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 PLD5Q8N7P1 536 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 CTNNBL1Q8WYA6 563 aaPredicted RBP12.08□□□□□ -0.48
SNHG4-208ENST00000514110 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 ASPSCR1Q9BZE9 553 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 BRD8Q9H0E9 1235 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 CLMPQ9H6B4 373 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 RMI1Q9H9A7 625 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 PRDM8Q9NQV8 689 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 ATXN10Q9UBB4 475 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 HEY1Q9Y5J3 304 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 HEMK1Q9Y5R4 338 aaPredicted RBP12.08□□□□□ -0.48
SNHG4-208ENST00000514110 LRRD1A4D1F6 860 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 C3orf70A6NLC5 250 aaPredicted RBP12.07□□□□□ -0.48
SNHG4-208ENST00000514110 GOLGA6L19H0YKK7 550 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 GRID2O43424 1007 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 F3P13726 295 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 ZNF8P17098 575 aaPredicted RBP12.07□□□□□ -0.48
SNHG4-208ENST00000514110 MAPK9P45984 424 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 RAB15P59190 212 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 MC2RQ01718 297 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 AP1B1Q10567 949 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 MESDQ14696 234 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 SLC18A3Q16572 532 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 ALS2CLQ60I27 953 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 NPNTQ6UXI9 565 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 KDELC2Q7Z4H8 507 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 GPR26Q8NDV2 337 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 NCSTNQ92542 709 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 RTP4Q96DX8 246 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
SNHG4-208ENST00000514110 CTRCQ99895 268 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 HERPUD2Q9BSE4 406 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 SPATA16Q9BXB7 569 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 TBC1D10AQ9BXI6 508 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 ADGRE3Q9BY15 652 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 SPRY4Q9C004 299 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 TRIM4Q9C037 500 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
SNHG4-208ENST00000514110 OR2AG1Q9H205 316 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 CARD9Q9H257 536 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 ZFYVE1Q9HBF4 777 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 APMAPQ9HDC9 416 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 PILRAQ9UKJ1 303 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
SNHG4-208ENST00000514110 MYO18BQ8IUG5 2567 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 KIR2DS5A0A0G2JLQ3 304 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 A0A0G2JNG1 304 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 KIR2DS3K7RE56 304 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 TERTO14746 1132 aaKnown RBP12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SLC4A1P02730 911 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 TMEM253P0C7T8 217 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SFTPCP11686 197 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 EPHA4P54764 986 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 KIR2DS5Q14953 304 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 TIPARPQ7Z3E1 657 aaKnown RBP12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SLC9B2Q86UD5 537 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SLC35G2Q8TBE7 412 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 TADA1Q96BN2 335 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 IMP4Q96G21 291 aaKnown RBP12.06□□□□□ -0.48
SNHG4-208ENST00000514110 AGAP3Q96P47 875 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 OLFM3Q96PB7 478 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 DNAJC7Q99615 494 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 STN1Q9H668 368 aaKnown RBP12.06□□□□□ -0.48
SNHG4-208ENST00000514110 KLC4Q9NSK0 619 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 GEMIN8Q9NWZ8 242 aaKnown RBP12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SCHIP1Q9P0W5 487 aaPredicted RBP12.06□□□□□ -0.48
SNHG4-208ENST00000514110 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 SLC23A2Q9UGH3 650 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 KLHL3Q9UH77 587 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 LCMT1Q9UIC8 334 aa12.06□□□□□ -0.48
SNHG4-208ENST00000514110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.06□□□□□ -0.482e-6■□□□□ 11.1
SNHG4-208ENST00000514110 OR5K4A6NMS3 321 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 SUV39H1O43463 412 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 PPFIA2O75334 1257 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 SLC25A14O95258 325 aaPredicted RBP12.05□□□□□ -0.48
SNHG4-208ENST00000514110 SLC2A4P14672 509 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 CLCNKAP51800 687 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 DCDC1P59894 354 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 UBE2IP63279 158 aaKnown RBP12.05□□□□□ -0.48
SNHG4-208ENST00000514110 PCSK7Q16549 785 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 PLA2G4EQ3MJ16 856 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 BORAQ6PGQ7 559 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 CRTC3Q6UUV7 619 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 CEACAM20Q6UY09 585 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 ADGRG6Q86SQ4 1221 aa12.05□□□□□ -0.48
SNHG4-208ENST00000514110 NT5DC3Q86UY8 548 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms