RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 GALNT2Q10471 571 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 TAF1CQ15572 869 aaPredicted RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 PFKFB4Q16877 469 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SLC36A3Q495N2 470 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 NOMO2Q5JPE7 1267 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 MORN1Q5T089 497 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 ZNF773Q6PK81 442 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 RORBQ92753 470 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 MYLPFQ96A32 169 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 PGAP3Q96FM1 320 aaPredicted RBP9.6□□□□□ -0.87
VCAN-210ENST00000513960 GPR22Q99680 433 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 FUNDC2Q9BWH2 189 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 AKTIPQ9H8T0 292 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 SMURF2Q9HAU4 748 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 TNFRSF12AQ9NP84 129 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 NSMCE4AQ9NXX6 385 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 FBXO5Q9UKT4 447 aa9.6□□□□□ -0.87
VCAN-210ENST00000513960 UBA6A0AVT1 1052 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 SUPT3HB4E1H0 165 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 KPNA6O60684 536 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 MOCS2O96007 188 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 CD68P34810 354 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 GSK3BP49841 420 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 AFF1P51825 1210 aaKnown RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 NEK2P51955 445 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 PLA2G16P53816 162 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 DCLRE1AQ6PJP8 1040 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 THAP5Q7Z6K1 395 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 ABI1Q8IZP0 508 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 PTGR2Q8N8N7 351 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 TRPV3Q8NET8 790 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 SPATA17Q96L03 361 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 PPM1MQ96MI6 270 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 ALPK1Q96QP1 1244 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 HBEGFQ99075 208 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 C17orf80Q9BSJ5 609 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 SEZ6LQ9BYH1 1024 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 RHOBTB2Q9BYZ6 727 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 WDR12Q9GZL7 423 aaKnown RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 TPK1Q9H3S4 243 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 AAR2Q9Y312 384 aaKnown RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 TRIP12Q14669 1992 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 ARL5CA6NH57 179 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 PIP5K1BO14986 540 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 TRIM24O15164 1050 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 RPL9P32969 192 aaKnown RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 MLLT10P55197 1068 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 PURAQ00577 322 aaKnown RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 DGUOKQ16854 277 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 RAB41Q5JT25 222 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 GPR158Q5T848 1215 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 ZDHHC13Q8IUH4 622 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 ITFG1Q8TB96 612 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 CALML6Q8TD86 181 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 PABPC5Q96DU9 382 aaKnown RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 MAGED4Q96JG8 741 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 MLPHQ9BV36 600 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 TRIM62Q9BVG3 475 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 OSBPL2Q9H1P3 480 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 MIOSQ9NXC5 875 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 LRRC14BA6NHZ5 514 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 I6L893 689 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 BCAS1O75363 584 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 INMTO95050 263 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 THRBP10828 461 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 DNAJB2P25686 324 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 SHMT2P34897 504 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 HADHAP40939 763 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 CHRNA4P43681 627 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 HLCSP50747 726 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 HK2P52789 917 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 AASDHQ4L235 1098 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 TIGD5Q53EQ6 642 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 NEPROQ6NW34 567 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 GALNT5Q7Z7M9 940 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 TAC4Q86UU9 113 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 GATAD2AQ86YP4 633 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 TOP1MTQ969P6 601 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 SH3YL1Q96HL8 342 aaPredicted RBP9.59□□□□□ -0.87
VCAN-210ENST00000513960 ZNF347Q96SE7 839 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 HPS4Q9NQG7 708 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 AASSQ9UDR5 926 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 LIMD1Q9UGP4 676 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 Q9Y3F1 56 aa9.59□□□□□ -0.87
VCAN-210ENST00000513960 MYO1GB0I1T2 1018 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 H0Y626 953 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 RAD51BO15315 384 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 XPNPEP2O43895 674 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 SULT1C4O75897 302 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TRIM16O95361 564 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TNK2Q07912 1038 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 BNIP2Q12982 314 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 GTF2H3Q13889 308 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 GRB7Q14451 532 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 RBBP7Q16576 425 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 KCTD11Q693B1 232 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 CLEC14AQ86T13 490 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms